Gene Amuc_0667 details

Gene Information

• Locus tag: Amuc_0667
• Symbol: leuD
• ID: 6273971
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Akkermansia muciniphila ATCC BAA-835
• Kingdom: Bacteria
• Replicon accession: NC_010655
• Strand: +
• Start bp: 784866
• End bp: 785474
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 642612719
• Product: isopropylmalate isomerase small subunit
• Protein accession: YP_001877285
• Protein GI: 187735173
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 79
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCTCTGA CCCAATTCAC CTCCATCACC GGCACCTGCG TTCCCGTTCC GGGACCGGAC 
ATGGACACGG ACCGCATCAT CCCTGCCCGC TTCCTTAAAT GCATCACGTT TGACGAACTG 
GCGGGAGTCA TGTTCTGGGA CGAACGCTTC GACGAAAACG GACAATCCAA ATCCCACCCG 
GTGGACGATC CCCGCTTCAA AGGGGCTTCC ATCATTTTGG GCGGCTCCAA CTTCGGCTGC 
GGCTCCTCCC GTGAGCATGC CCCGCAGACG ATCAGGCGCT CCGGCATCAA AGCCGTCATT 
GCGGAATCTT TCGCGGAAAT CTTTTTCGGC AACAGCACCG GCATCGGTTT GCCCTGCGTG 
TGCGCGTCTG CCGCCGACAT TGCCGCTCTG GCCCGGCACA TTTCCGATCA CCCGGAAACG 
GAAGTGACGA TTGACCTCCT GAACATGACA GCTTCCTGGA AGGAAGGCTC CTTCCCCATC 
CGGATGCCGG CGGAAGCCCG CGAAGCCCTG ACCCGGGGCC GCTGGGATTC CATTGCGGAA 
CTGCTTGTCA ACATGGATGC CGTAGAAAAG AAAAACAAGG AACTGCCCCA GGTCGCAGCC 
TCCTGCTGA 

 

Protein sequence

MSLTQFTSIT GTCVPVPGPD MDTDRIIPAR FLKCITFDEL AGVMFWDERF DENGQSKSHP 
VDDPRFKGAS IILGGSNFGC GSSREHAPQT IRRSGIKAVI AESFAEIFFG NSTGIGLPCV 
CASAADIAAL ARHISDHPET EVTIDLLNMT ASWKEGSFPI RMPAEAREAL TRGRWDSIAE 
LLVNMDAVEK KNKELPQVAA SC