| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0639 |
|---|
| Symbol | |
|---|
| ID | 6274164 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 752407 |
|---|
| End bp | 753024 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642612691 |
|---|
| Product | transferase hexapeptide repeat containing protein |
|---|
| Protein accession | YP_001877257 |
|---|
| Protein GI | 187735145 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 0.760185 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAT TCCTTATCCA TCTGCTTTCC GGGATAGGCC GCCTGCTGCT CAGGCTCAGG
GGGGTGCGCA CCGGAACAGG CATCATTCTT TCCGGATTTC CCCTCATTAA AAAATTCCCG
GGAGCGTCCA TCACCATCGG CAACGGAGTC ACCATCCACT CCCTGACCCG GATGAATCCG
GTACTTTCCC ATCACACCTG CCTGGCCGCC CTTTCCAATC AGGCAAGCAT CATTCTGGAG
GACGGCTGCG GCATCAGCGG AGCCACCCTG GTCTGCGTCA ACGGCATCCG CATCGGCCGC
CACACGCTGA TAGGAGCAGA CGCGCTGATT CTGGACAACG ACATGCACTA TCCCCGGAGC
GGCGCCAGGT GGGGATCAAC CCTGGGACAG CCCGAACAGG GACAACCCAT TTCCATCGGG
GAAGGATGCT TCATCGGCGC CAGGGCCACC ATCTTGAAAG GAGTCACCAT CGGCTCCGGT
TCCGTAGTCG CCGCAGGAGC CGTCGTCACC CGGGATGTGC CTCCCGGCTG CCTGGCCATC
GGAAATCCCG CAGTAAATAA ACCGCTCCCC GAACGTCTCA AACATCCCCG GGAAACACAA
AAAGCCATCT GCCCTTGA
|
|---|
| Protein sequence | MKLFLIHLLS GIGRLLLRLR GVRTGTGIIL SGFPLIKKFP GASITIGNGV TIHSLTRMNP
VLSHHTCLAA LSNQASIILE DGCGISGATL VCVNGIRIGR HTLIGADALI LDNDMHYPRS
GARWGSTLGQ PEQGQPISIG EGCFIGARAT ILKGVTIGSG SVVAAGAVVT RDVPPGCLAI
GNPAVNKPLP ERLKHPRETQ KAICP
|
|---|
| |