| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0629 |
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| Symbol | ruvB |
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| ID | 6274189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 739340 |
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| End bp | 740359 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642612681 |
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| Product | Holliday junction DNA helicase RuvB |
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| Protein accession | YP_001877247 |
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| Protein GI | 187735135 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
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| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.151039 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGAGT CCTTTTACAC ACGCACCACG GAGGCCCCCT CCTCCGCCTT CGATTTGTCC
CTCAGACCGC CCGCTTTCAG CGAGTTCTGC GGCCAGGAAA AGATTAAGGA CCGCCTGATG
CTGATGGTGG AAGCCGCCAG ACAGCGCGAC GACGTGCTGG ACCATATCCT GTTGAGCGGC
CCGCCGGGCC TGGGGAAGAC GACGCTTGCT AATATTATCG CGAATGCCGT CGGCTGCCGC
ATTCATACGA CTTCCGGCCC CCAGATTGAA AAGGCGGGAG ACCTGGCCGG CGTGCTGACC
AATCTGGAAA AGGGGGATAT TCTGTTTATT GACGAGATCC ACCGCCTGCA CCCGGCCATT
GAGGAGTATC TGTACCCGGC CATGGAGGAT TTCCGGCTGG ATATTATCAT CGACCAGGGG
CCGAACGCCC GCTCCATCCA GCTCAACCTG CCCAAGTTCA CCCTGGTGGG GGCCACCACC
CGCGCCGGGA TGCTGACCAG CCCGCTGCGT TCCCGCTTCG GCCTGGTGAA CCGGCTGGAT
TATTATACGC GGGAGGAGCT GTGCGCCATT ATCGAACGGT CCGCGGGGCT GCTGAACGTG
CCCGTGGACC CGGAGGGCGC CCTGCAGATC GCGCTGCGCT CCCGCGGCAC GCCCCGCGTG
GCCAATTCCC TGCTGCGCTG GGTGCGGGAT TACGCCCAGG TGCGCGGCGA CGGCGTGATT
ACGGAGCAGT TGGCGCACGA TGCCCTGACC ATGATTGAGA TTGACGACGA CGGCCTGGAC
GAGATGGACA AGCGCCTGCT GGAAGCGATG ATTTACAAGT TCAACGGCGG CCCGGTGGGC
CTTTCCTCCC TGGCGGTGGC CGTAGGGGAG GACGCTTCCA CGCTGGAGGA CGTGCACGAG
CCTTTCCTGA TTATGCAGGG GTATATCAGC CGCACCCCCA GGGGGCGCGT GGCGATGCCC
TCCGCCTATC TCAAGATGGG AGCCGCGCCG CCCGCCAACG GCCAGGGGTG GCTGTTGTAA
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| Protein sequence | MGESFYTRTT EAPSSAFDLS LRPPAFSEFC GQEKIKDRLM LMVEAARQRD DVLDHILLSG
PPGLGKTTLA NIIANAVGCR IHTTSGPQIE KAGDLAGVLT NLEKGDILFI DEIHRLHPAI
EEYLYPAMED FRLDIIIDQG PNARSIQLNL PKFTLVGATT RAGMLTSPLR SRFGLVNRLD
YYTREELCAI IERSAGLLNV PVDPEGALQI ALRSRGTPRV ANSLLRWVRD YAQVRGDGVI
TEQLAHDALT MIEIDDDGLD EMDKRLLEAM IYKFNGGPVG LSSLAVAVGE DASTLEDVHE
PFLIMQGYIS RTPRGRVAMP SAYLKMGAAP PANGQGWLL
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