| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0628 |
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| Symbol | |
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| ID | 6274193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 737728 |
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| End bp | 738453 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642612679 |
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| Product | hypothetical protein |
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| Protein accession | YP_001877246 |
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| Protein GI | 187735134 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.141009 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAAGA GATATAAGCA AATTTGTTAT TTATGTGGAA AGAAACTATC TAGAGGTTCT
TCTAATAGAA CTGTGGATCA TATTCCACCA AGAGGATTTT TTCCTGAAAA TTTTGATCGA
AAAGTTAATT TACCAACTGT TTTATGTTGT AGAAAATGTA ATAACTCATA CGCTAGGCTT
GATGAAGAAT TCCGATTCTT GCTCTCTAGT GGCAATTATC GTTCAAAAGC AGGAGATTGG
ATTTGGAACA ACAAATCCGA ACCTAAAATT GGAAAAAGTC TAATTAATTT TTGTGCAGAC
CTAGTAAGAG GTTTCAGGGG ATATGAGATT CTTCAAATGG AAGATTCTTT TTCACAAGCG
GTCAACATAA CAGTTTCTTA CACAGAAAAA ATACTTCCTT TTTTTAGCAG ACTAGCAAAA
GGATTTTTAG TGTATGATTC ACATAATTAT AAAAATTATG ACTTTGTTGT ATTTCCCTTG
TATAATTATC CAGAAATATA CAATATAATG ATGAAATATC CTGATAAAAG ATCATTTTTA
GATGATAACG GGGAACATAT ATTTTCTTAT GTTTATCAAC ATGATCAAAA ATTCGATAAA
GGATTCTTTT TCTTTTCTTT TTATAAAGAT CAGCATTTTG GTGTTCTTTT TGAAAGGTCA
ATTTACACTT CTACTTCAGA AAAGAAAATT TTGGATGATA TAATTAAGAA ATGGAATATT
TATTAA
|
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| Protein sequence | MNKRYKQICY LCGKKLSRGS SNRTVDHIPP RGFFPENFDR KVNLPTVLCC RKCNNSYARL
DEEFRFLLSS GNYRSKAGDW IWNNKSEPKI GKSLINFCAD LVRGFRGYEI LQMEDSFSQA
VNITVSYTEK ILPFFSRLAK GFLVYDSHNY KNYDFVVFPL YNYPEIYNIM MKYPDKRSFL
DDNGEHIFSY VYQHDQKFDK GFFFFSFYKD QHFGVLFERS IYTSTSEKKI LDDIIKKWNI
Y
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