Gene Amuc_0500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0500 
Symbol 
ID6275453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp590596 
End bp591096 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content57% 
IMG OID642612550 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001877119 
Protein GI187735007 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.579768 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAA TTTGCCTGGT CAACGTGTCT GATGTGGATG AGGCCATGCG CAGCCGCCTG 
CGCGTGTGGC GCAATTCCGA AAAGATCACC CCGTTTTTTT TGTTGGACCA GGTAACGGAG
GAGCAGCATC GGGCGTGGCT GGAAAGGAAC GTCCGCGGGG AGGATGCCCG CGCCTGCGTG
ATTTATGCGG ACCAGGTTCC GCTGGGTCTG GTTTACCTGC CCTGGTTTGA CCGGAATACG
CGTTGCGGAG AGATAGGCAT TTATCTTTAC GACAGGGCAT TCAGGGAACT GCGCCCGGCT
TCCGCCGCAT ATGCCGGGAT GATGGAGCTG GCCGCAGGGG AGCTGGGTCT GGAACGGTTA
TATGCCCGGA TTCTGGAGGA CAATGCGGCT TCCGTGCGTT TTCATGAGCG CATGGGTTTT
GCCCGTGTTC CGGAAAAGGA CGAGGTGTGC GAGAAAAGCG GGGAAAGGAA GCGCGTTCTC
ATGTATGTAA AAGCGTTATG A
 
Protein sequence
MMKICLVNVS DVDEAMRSRL RVWRNSEKIT PFFLLDQVTE EQHRAWLERN VRGEDARACV 
IYADQVPLGL VYLPWFDRNT RCGEIGIYLY DRAFRELRPA SAAYAGMMEL AAGELGLERL
YARILEDNAA SVRFHERMGF ARVPEKDEVC EKSGERKRVL MYVKAL