| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0364 |
|---|
| Symbol | |
|---|
| ID | 6274919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 429432 |
|---|
| End bp | 431012 |
|---|
| Gene Length | 1581 bp |
|---|
| Protein Length | 526 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642612415 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001876984 |
|---|
| Protein GI | 187734872 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 80 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCGC ACCGCCGCAG AATACCCCGC CTCACCTGGT TCAAGCTCGC AGTCTGCATC
TGCCTGGCAG CCATGGCAGC CTCCCTGTTC ACGCCGTACC CCGCCCAGAT CATACGCGCC
CTGAAAGGGG CGCCGGAACA GGCACCGCCG GATTCCGGAA CCTGTCCGCC CCAGAAATCC
CCCCCCGCGG AACAACCCGG GCAGGAAGAA CAGCCAATAA CCGCTGCACC ATCCGCCTCC
GGAAAGGAAC CCGGGGATGA ACGGCTGTAC ACTCCATGGA CGCCGGAGCG CACAATCGCC
CTCCCCCCGG TGCAGTACCC CCCATTTCCC CCCGTGCTTC CCACAAGGCC TGCGGAAGGG
GCCATGACCC ATATTTATGA ACTGGCCCGC GGACTGAACC TGAAAACGCA GGTTAATTTC
CAGCCCGGCA CCCTGGCCTC CAGGGACAGG GAAACCAAAA GCAATTACCA GATGACCCTT
TCCCTGAACG TCAAACAGCC CAAAGCATTG ACGAAAAAGG AAGATATGCT GAAGCTCAAT
CCGAAACTGG AACCCATGCT TCCCGGCCTG TCCACCCTGT TCAGGCATGC GCGCGTCTCC
CCTTACTACG GGCAGATTTA CGTCCGCAAA CAGACGGAAA TCCGTAAAAA CCTGGCCTCC
CTGCTCAAAC TTCTGGACCG CCATAATTAT TACGATACGG AGACGATTCT GGAAACCACC
TATCCGGACA CGGGAAGGAA GCTTCTCTGG CTGCAAAGTG AAATGGATGT TGTTTCCGAC
GGCTCGGACG GGGACCGGCT GGCCGCCATG CCGGATAAAA TCCTGAAAAG CTCCTTCTAT
CAGCCCAGCA CTTCCTACCG CTGGAAAAAG CGCACAGACA AGCCCAATCC CCTGCTCAAA
CCCTGGCAGC AGAGGCTGGC TTCCTACAAG AAGACGCTGG AAAAAGCCCC CGCCGCGGAA
AAAACGGCTC TGCGCCGCAA AATAGACCAT GCGGAACGGG TCATTGAGGA ACTGAAGCGG
TACAGCTTCC TGATCTCAGA ATACGATCCG TTCATCGTGG TTCCGCTGGG AGTCGTCAAC
CAGTCCACTC CCTTCTCCCC GCAGTTCGGG GACTATGCCG TCGTCATCGT GGGAGACAAG
TTGTACCCGG CCCTGGTGGG AGACGCCGGG CCGCGCTACA AAACCGGGGA GGGTTCCCTG
CGCCTGAGCC GTGAAATCAA CCCCAAGGCG GGCCCTTACA GCCGCCCCGT CTCCGACCTG
AAGGTAAGTT ACCTGATTTT CCCCGGTTCC GCAGAGCCCG AGGCCGGGCC TCTCGACTAT
GAAAAAATTA CGGACAGATG CCGGGAACTT CTCAACGAAA TAGGCGGCGT GGGGAAAGGA
TTCAACCTCC ACCAGTGGGA AGACCTGCTG GCGCCCAAGC CACCGCCCGC CCCAAAACCG
GAAAGCGGCG GCACAGCGGA AACACCTGCA GATAAGCGGA AAAAGGAGGA AGCTCCCGGA
AACAAGCCTG CCCCTGCCCC GGCTCCGCCG GCTTCCCCGC AAACTGCTCC GGCTTCATCA
GCCGCAAAAA GCGCCGCATA A
|
|---|
| Protein sequence | MKAHRRRIPR LTWFKLAVCI CLAAMAASLF TPYPAQIIRA LKGAPEQAPP DSGTCPPQKS
PPAEQPGQEE QPITAAPSAS GKEPGDERLY TPWTPERTIA LPPVQYPPFP PVLPTRPAEG
AMTHIYELAR GLNLKTQVNF QPGTLASRDR ETKSNYQMTL SLNVKQPKAL TKKEDMLKLN
PKLEPMLPGL STLFRHARVS PYYGQIYVRK QTEIRKNLAS LLKLLDRHNY YDTETILETT
YPDTGRKLLW LQSEMDVVSD GSDGDRLAAM PDKILKSSFY QPSTSYRWKK RTDKPNPLLK
PWQQRLASYK KTLEKAPAAE KTALRRKIDH AERVIEELKR YSFLISEYDP FIVVPLGVVN
QSTPFSPQFG DYAVVIVGDK LYPALVGDAG PRYKTGEGSL RLSREINPKA GPYSRPVSDL
KVSYLIFPGS AEPEAGPLDY EKITDRCREL LNEIGGVGKG FNLHQWEDLL APKPPPAPKP
ESGGTAETPA DKRKKEEAPG NKPAPAPAPP ASPQTAPASS AAKSAA
|
|---|
| |