| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0311 |
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| Symbol | |
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| ID | 6275068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 366881 |
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| End bp | 368032 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642612365 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_001876934 |
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| Protein GI | 187734822 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.138677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAAG ACACCATTGA CAAGCTGATC GGCCGCATTG ACCACATCAA GGAGGAGGAT
CTCCAGCGCT TTTTTGTCAA GCTGGCGGAA CAGCAGGGTT TTTTCCAGCA GGTATTTGAA
GCCATTCAGG AAGGCCTGAT CCTGCTGGAT AACAAGGGAA AAATTCTGTT CGTCAACAAG
GCTGCCCTTA AACTCTTTGA CAAGGAACGC GGGCAAATAA CCCCGGATGA CTTCTGTATT
TTCCTGGGCA GGGACTGCTC ATGGGACACG ATCCAGCAGA GCCAGACCGC CGTCTCCCGG
GACACGGAAA TCTTTTACCC GGAACACAGA TTCCTGAACA TTTTCATTTC CCCCATCGGC
AGCAAAAACC AGGGCCACCT GGTCCTGATA CGGGATGAAA CGCCCCGGCA TAAAAAAAAC
GCGGAAAACC TTGAGGCAGA ACGCCTGAAT GCCTTGACGC TGCTGGCCGC AGGAGTGGCT
CATGAAATAG GCAACCCCCT CAATTCCATA GGCCTCCATC TCCAGCTCCT TGCCAGGAAG
GCAAAGCAGC TGCCTCCAAA GTACCGGACG GACATGGAGG AATTGCTGAA AACAGCGGAG
AGCGAAACCA CGCGGCTGGA CGTTATCCTG AAGCAATTCC TCCAGGCCAT CCGCCCCACC
AGGCCCATCC GGGAACCCTA CAACATTGAA ACCATCCTCA TGGAAGTGCT GAAACTGCTG
GAACCGGAAA TCCAGCAGCG CGGCATCCAA ATCAACACGG ACCTCCAGCC CAGTCTTCCC
ATCCTCAGCC TGGACCCCGT CCAAATCAAA CAGGTCTTTT ACAACCTGAT CAAGAATGCC
TACCAGTCCA TCCCTCCGGA GGGAGGCACC ATTCTGCTCA AAAGCGGTTA TACGGATGAC
AGCGTATTCG TCACTGTGGC GGATACCGGC TGCGGTATTT CACCGGAGGT CATGGGCAGC
ATTTATGAAC CTTTCCTGAC CACCAAGTCC ACCGGCTCCG GACTGGGGCT GCTTATCGTT
CGCCGCATCG TGAAGGAGCA CGGCGGGTCC ATCACGCTGG CCAGCCAGCC GGGTCAGGGA
ACCACCATCA CGGTCTTCCT GCCGCGCGTG GAACGCACCA TCAGGCTCCT GCCATCCTCC
ATTCCCTCAT GA
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| Protein sequence | MKKDTIDKLI GRIDHIKEED LQRFFVKLAE QQGFFQQVFE AIQEGLILLD NKGKILFVNK
AALKLFDKER GQITPDDFCI FLGRDCSWDT IQQSQTAVSR DTEIFYPEHR FLNIFISPIG
SKNQGHLVLI RDETPRHKKN AENLEAERLN ALTLLAAGVA HEIGNPLNSI GLHLQLLARK
AKQLPPKYRT DMEELLKTAE SETTRLDVIL KQFLQAIRPT RPIREPYNIE TILMEVLKLL
EPEIQQRGIQ INTDLQPSLP ILSLDPVQIK QVFYNLIKNA YQSIPPEGGT ILLKSGYTDD
SVFVTVADTG CGISPEVMGS IYEPFLTTKS TGSGLGLLIV RRIVKEHGGS ITLASQPGQG
TTITVFLPRV ERTIRLLPSS IPS
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