| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0288 |
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| Symbol | |
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| ID | 6275134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 345123 |
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| End bp | 345848 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642612342 |
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| Product | UbiA prenyltransferase |
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| Protein accession | YP_001876911 |
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| Protein GI | 187734799 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.16612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATGATT GCCGTTTATT GAGAGGAGTG CTCCGTTCCT CCCGTCCGGC CAATATTCCC
ACGCTGTTTA CCAACGCGGC GGCGGCGTGG GCTTCCGTCC GTGGGGCGGA GCTGCCGCCT
CCCGCCCTGT ATGGGGGCGT AGTGCTGATG GGGCTGTGCT TTTATTTGTA TGGCATGTGG
GAGAATGACC GTGTGGACGC CAGGTGGGAT GCCGCCCGTT ATCCGGACCG CCCCGTGCCG
TGCGGCGCGG TGAGCGTTTC CGTACTGAGG CTGTTGTCTT TGGCGGCCGG GTTGTCCGGC
CTGGTGCTGA ACATGGCGCT GGGCGGGGAA TTTGCCGTGG GGGCTTTGCT GCTGATTGTG
ATTTCCCTGT ATAATGTGTT CCATAAACTG TGGAGCGGCT CCATTGTTTT GATGGGGTTG
TGCCGCGGGG TGTGGGTGCT GGCCGCCGGC CTGGCATTTG CCCGTTCGGG TGGAGAGTCC
GTTCCTCCTC CGGCCTTGCT GTGGTATGCT TTCGGCCTGT TTTTGTTTAC CTGCGTGATT
TCCGCCGTAG CACGGCGTGA GGCGGGCAGG CCCCGGGTTC AAAGGGCTGT GACGGTGCTG
CTTTCCGGCA TGTGCCTGTT TGATGCGGTA TGGCTCCTGA GTTTCGGTTC CTTGCTGTGG
CTTGGTTCCG TCTTATTATG GGCGGGAACG CGGCTGCTGC AGAAGCTCGG CTGCCGGGCC
ACATAG
|
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| Protein sequence | MHDCRLLRGV LRSSRPANIP TLFTNAAAAW ASVRGAELPP PALYGGVVLM GLCFYLYGMW
ENDRVDARWD AARYPDRPVP CGAVSVSVLR LLSLAAGLSG LVLNMALGGE FAVGALLLIV
ISLYNVFHKL WSGSIVLMGL CRGVWVLAAG LAFARSGGES VPPPALLWYA FGLFLFTCVI
SAVARREAGR PRVQRAVTVL LSGMCLFDAV WLLSFGSLLW LGSVLLWAGT RLLQKLGCRA
T
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