Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0112 |
Symbol | |
ID | 6274932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 140311 |
End bp | 141240 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642612157 |
Product | aspartate carbamoyltransferase |
Protein accession | YP_001876738 |
Protein GI | 187734626 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATCATC CCCGCAAGGA TCTTCTTAAT ATCTCCTCAT TGACTGACGA GGAAATTCAC ACGCTGCTGG ATTCGGCCGG CCCGATGAAG GAGCTTTTTA CCAAAAGCGT CAAAAAGGTG CCCGCCCTGA AAGGCAAGTC CGTTCTGACG CTTTTTTATG AACCCAGCAC CCGCACCCGT TCCTCTTTTG AGGTAGCGGC GGAACGCCTG TCTGCGGACG TGACCAATTT CACGGTGTCC ACCTCTTCCG TGGTGAAAGG GGAATCCGTA CAGGACACGA TCGCCACGCT CCAGGCCATG AAAGTGGATT ATGTAATCGT GCGCCATTAC AACAGCGGCT TGCCGAACGT GATTGCGCGC CATACCTGCG CCAGTGTGGT GAACGCCGGG GACGGAGCCC ACGCCCATCC CTCTCAGGCG CTGCTGGATT CCTTTACCAT CCGGGAGGTG TTTCCGGATG TGAGGGGAAA GCGCGTTCTG ATTGTGGGGG ACATCCTGCA TTCCCGCGTG GCCCGTTCCA CCTCCCTGCT GATGAAGAGG CTGGGGATGG AGGTCGCCTT CCTGGGGCCG GGTTCCCTGG TGCCGCGTAC CGAACATTCC GGCATTCCCC GTTTTTCCGA TTTCAATGAG GCGTTTGCCT GGAAGCCGGA CGTAATTTAC CTGCTGCGCG TTCAAAAAGA GCGGCAGGAC GCCCCTTTCT TCCCCAGCGC CCGGGAGTAC AACAAGATTT ACGGCGTCAC GGAAGAACGC CTGAAGCGCA TTTCCGGTGA AGGCCTGTAC ATCATGCATC CGGGGCCGGT CAACCGCGGC GTGGAAATCT GTGACCTGGC GATGGACTAT GAGCGCTGCC TGATCAACCG CCAGGTGGAA AACGGCATCG CCTGCCGCAT GTCCATCCTT TACCATCTCA CTCCGCAAAC CCAGCACTGA
|
Protein sequence | MNHPRKDLLN ISSLTDEEIH TLLDSAGPMK ELFTKSVKKV PALKGKSVLT LFYEPSTRTR SSFEVAAERL SADVTNFTVS TSSVVKGESV QDTIATLQAM KVDYVIVRHY NSGLPNVIAR HTCASVVNAG DGAHAHPSQA LLDSFTIREV FPDVRGKRVL IVGDILHSRV ARSTSLLMKR LGMEVAFLGP GSLVPRTEHS GIPRFSDFNE AFAWKPDVIY LLRVQKERQD APFFPSAREY NKIYGVTEER LKRISGEGLY IMHPGPVNRG VEICDLAMDY ERCLINRQVE NGIACRMSIL YHLTPQTQH
|
| |