| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0107 |
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| Symbol | |
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| ID | 6274946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 133142 |
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| End bp | 136318 |
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| Gene Length | 3177 bp |
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| Protein Length | 1058 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642612152 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_001876733 |
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| Protein GI | 187734621 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCGT TTTTCATCAA GCATCCCGCA ATCGCAGCCG TGATTGCCAT TGTGACCACG
CTGCTGGGGC TGGTCTGCAT GTTCAACCTG CCTATTTCCC AGTATCCGGA AATCACGCCG
CGCACCATCC AGCTTCAGGC CATGTTTCCG GGGGCCAGCG CGCAGGCGGT GGCGGATTCC
GTGGGCACTC CCCTGGAACG CCAGATTTCC GGCGTGCAGG GCATGGACTA CATGACGTCC
GTTTCCTCCA ACAACGGCGT GTATAACCTT TCCGTCATTT TTGAACCGGG TTCTGATACG
GATATTGACC AGGTGCTGAC CAATATGCGC TATGGGCAGG CCTCCTCCCA GCTTCCGCAG
GAAGTTCAGA GCACGGGCGT GACCATCAAG CAGCAGCCGG GGCTTCCGCT GATGATTTAT
TCCCTGACAT CCCCGGACGG CAGTTATAAT TCCGTGGATT TGGCGAACTA TGCCCAGGTG
AAGCTGGTGG ATGAACTCAA GCGCGTGGAG GGCGTGGGGG AAGTTCAGGT GTACGGCGCG
GGGCGTTATG CCATCCGCAT CTGGCTGGAT ACGTCCAAAA TGACCCATTA CGGCGTTTCC
GTCAATGAAG TGCGGGGCGC CATCTCCGCC CAGAACACCA CCAACCCCGG CGGCAAGATT
GGGGCGGACC CCGTGCCGGA CGGCCAGGAG CAGACCATTA CCGTGCGCAC TCAGGGGCGT
CTTTCGGAGC CCCATGAATT TGAAGACATC ATCATTCGCC AGAATGGGGA TGAAATCCTG
TACCTGAAAG ATATTGCCAA GGTGGAACTG GGAGCTGAAG ACTATTCCGC CACCGGCCGC
CTGAACGGAG AAGTTTCCGC GGCTATCGTT ATCTTCCAGT CTCCGGGTTC CAACGCCATC
GCTACGGCGG ACCGCGTGGA AAAACTGCTG GAAGCCAAGG CTCCGCTGAT GCCGGAAGGA
ATTACCGGGC GCGTTTCCCT GGATACGACT ACGGCGGTGC GCTATTCCAT TGATGAAATC
AAGCACACGT TCATGGAAGC CGTCATCCTG GTGGCCCTGG TCGTGTATGT TTTCCTTCAA
AACTGGCGCG CCACCCTCAT TCCGCTCATC GCCGTTCCGG TTTCCCTTAT TTCCACGTTC
TGCCTCTTTC CCGTCCTGGG GTTTTCTCTG AACACCATTT CCCTTCTTGG CATGGTGCTG
GCCATCGGCC TGGTTGTGGA TGACGCCATT GTGGTGGTGG AAGCCGTGCA GGAGCACATA
GACAAGGGGC TCAATCCGCG CATGGCTTCC TTCGCCGCCA TGCAGGAGGT ATCCGGCCCC
GTCATCGCCA TTGCCTTGGT GCTGGCGGCG GTATTCCTGC CTTCCCTGCT GCTGGAGGGC
ATCACGGGAA CGCTGTTCAA GCAGTTCGCC GTGACCATCG CCATTTCCAT GCTCATTTCC
GCCTTTAATG CGCTGACGCT TTCCCCTGCC TTGTGCGCCC TGTTGCTGAA ACCCCGGAAT
GCGGGCAGGA AGAGCCTCTT TTCCCCATTT CACCGTTTGT TCAACTGGTG TTACGGACGT
GTCTCCAACG GCTATACCCG CATGTGCGGA AGCCTGGCCC GCAAGCTGGC GATTTCCATC
CCCCTCCTGT TGTTATTCTG GGGGGCGGTG GCTCCTGTGG CGGAGCGCGT TCCCGGCGGC
TTTCTTCCGG ATGAGGACCA GGGCTTTCTG CTGGCCTGCC TGATCCTGAA GCCGAATACC
TCCCTGCAGG TTGCCTATGA ACAGGACAAA AAATTTGAGG CGGCCCTCCA GGATCCCGCC
GTGAAGAACC TTACTACCGT GGTGGGGCTC AACATCCTCA ACAGCGTGCA GACTCCCGGC
GCCTGCATTG CCTACATTGA GCTCAAGGAC TGGAGCGAAC GGCCGGAAAC CTCCGCGGAG
CTGGCCGGAA AGCTTCAGGG AAAGCTGGCC CAGGCCGGCC TGGACGGTAT GGCGATGGTG
CTGGAACCTC CCGCCATCCC CGGCGTGGGA ACCGCCAACG GGGTTACGAT GGTACTGGAG
GATCTGGAAG GGCAGGGCGT AGCTTATCTG CATGAACAGG TGCAACGGTT CCAGGAAGCG
GCTTCCCGGC GTCCGGAAAT AGCCTTGTGC ATAGACATGA TGATGGCGGA CATGCCGCAG
AAGTACGTGA ACCTGGACAA GGAAAAATGC AAATTCCACA AGGTGGATAT TGACGTGGCC
AACGGCATTC TGGCCTCCTA CAACGGTTCC TCCTTCATCA ATTACTTCAA TGCCTTCGGC
CAGCAGTGGC AAGTGTATAT CCAGGCGCAG GGCGAAGACC GCGCCAGCCT GGAGAAGATG
GACGGCTTCT TTGTCACGAA CGCGGACGGA GCCCGCGTGC CTCTCTCCGC CCTGGTAAAC
ATCAGAGAGA TAGAGGATAC GGAATTCGTG ATGCACCATA ACATCTACAA CGCCGCCAAA
TTGAACGTGA TGCCCCGGCC CGGCCACTCC ACCCAGCAGG TGATGGACGC GCTGGAGGAA
GTGTTCCATC AGACGATGGA TCCTACGAAG GTTGGCTTCG ACTACCAGGA CATGAGCTTC
CAGGAAAATA AAGTGCGCAA CAGTATTGGG CTGGGGGCCA TCTTCACCAT GTCCGCCGTT
TTCGCCTTCC TTATCCTGGT GGCGCTTTAT GAGAAATGGT CTCTTCCCCT GGCGGTTTTC
CTCACGGTTC CCATTGCCGT GCTGGGGGCC TATGCAGGGT TGTTCTGGCA GGGCATGGAG
CTGACGCTCT ACGCGCAGAT CGGTCTGGTG ATGCTGGTGG GTCTGGCGGC CAAGAACGCC
ATCCTCATCG TGGAATTCGC CAATCTGGAG ATGCAGCGCG GCAAGGGCCT GATGGAGGCT
ACGCTGGTTG CCGCGCGTCT GCGCCTGCGT CCCATTTTGA TGACTTCTCT GGCATTCGTT
CTGGGATGTA TCCCCCTGAT GCTTTCCTCC GGTTCCGGAG CTCTGGCGCG CAACGCTATC
GGTACGGTGG TGGTGATTGG CATGGGGGTG GCTACACTGG TGGGCGCTTT TCTGATTCCA
TGTTCTTATG TGTTCATCAT GAGATTATTC CGTATTAAAT TCTCCCTGAA TGATCTGAAG
GAGGATCCGG ATGAAGTGGG AGCCAGGAAA TACCTGGCCG CCCATACGAA GGACTGA
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| Protein sequence | MSAFFIKHPA IAAVIAIVTT LLGLVCMFNL PISQYPEITP RTIQLQAMFP GASAQAVADS
VGTPLERQIS GVQGMDYMTS VSSNNGVYNL SVIFEPGSDT DIDQVLTNMR YGQASSQLPQ
EVQSTGVTIK QQPGLPLMIY SLTSPDGSYN SVDLANYAQV KLVDELKRVE GVGEVQVYGA
GRYAIRIWLD TSKMTHYGVS VNEVRGAISA QNTTNPGGKI GADPVPDGQE QTITVRTQGR
LSEPHEFEDI IIRQNGDEIL YLKDIAKVEL GAEDYSATGR LNGEVSAAIV IFQSPGSNAI
ATADRVEKLL EAKAPLMPEG ITGRVSLDTT TAVRYSIDEI KHTFMEAVIL VALVVYVFLQ
NWRATLIPLI AVPVSLISTF CLFPVLGFSL NTISLLGMVL AIGLVVDDAI VVVEAVQEHI
DKGLNPRMAS FAAMQEVSGP VIAIALVLAA VFLPSLLLEG ITGTLFKQFA VTIAISMLIS
AFNALTLSPA LCALLLKPRN AGRKSLFSPF HRLFNWCYGR VSNGYTRMCG SLARKLAISI
PLLLLFWGAV APVAERVPGG FLPDEDQGFL LACLILKPNT SLQVAYEQDK KFEAALQDPA
VKNLTTVVGL NILNSVQTPG ACIAYIELKD WSERPETSAE LAGKLQGKLA QAGLDGMAMV
LEPPAIPGVG TANGVTMVLE DLEGQGVAYL HEQVQRFQEA ASRRPEIALC IDMMMADMPQ
KYVNLDKEKC KFHKVDIDVA NGILASYNGS SFINYFNAFG QQWQVYIQAQ GEDRASLEKM
DGFFVTNADG ARVPLSALVN IREIEDTEFV MHHNIYNAAK LNVMPRPGHS TQQVMDALEE
VFHQTMDPTK VGFDYQDMSF QENKVRNSIG LGAIFTMSAV FAFLILVALY EKWSLPLAVF
LTVPIAVLGA YAGLFWQGME LTLYAQIGLV MLVGLAAKNA ILIVEFANLE MQRGKGLMEA
TLVAARLRLR PILMTSLAFV LGCIPLMLSS GSGALARNAI GTVVVIGMGV ATLVGAFLIP
CSYVFIMRLF RIKFSLNDLK EDPDEVGARK YLAAHTKD
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