Gene Amuc_0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0081 
Symbol 
ID6275034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp107958 
End bp108536 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content54% 
IMG OID642612124 
Producthypothetical protein 
Protein accessionYP_001876707 
Protein GI187734595 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.541096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCCT CTGTTTTCCT GCGGCGCATG CTCCCTATGC TGGCCGCGTT CCTGATGGCC 
TCCTGCGGTG ATCCTACCGT CTCCTACTGG AAAGAGGTGG CGGACATCAA TACGGAATAC
TCGGAAAAAA GCGACGCACT GGTGCAACAC CTCCTGAAAC TGAAAAAGAA CCCTACCCTT
CCGGGCCTGG AAGAAAGCAG CAGGGATGCG GCTGACCTGT TGCGGGAAAG GGATGAAGAA
CTGGCGGACC TGAGCACGAA AAACGTGGAT CCCGCCGTGA CGGCCTATGT GGAAGAAGAC
CGCAAGCTTT TTGCCAGAGG AAGGGAATTG GCGGAACGCT ACCAGCAATA CTTTGAAAAA
TATCTTAAGG GAGGACCGGA TTTTACTCCG GATCCTTCCC GGGCCGTCGC CCATATAGGC
CGGGGCCGGC AGGAAATACG CAAAATTCTG GCAGAAGCCC GAAAACTGGA AGCTCGGGCT
GAAATGCTGA GAAAAGAAAA ATCAGCTGAG CTTGAGCAAG AACTTCCTCC GCTGCACTTT
CGCCTTCCGG AGTTGAAACA ACTTCTATCC AGCCGTTAG
 
Protein sequence
MNASVFLRRM LPMLAAFLMA SCGDPTVSYW KEVADINTEY SEKSDALVQH LLKLKKNPTL 
PGLEESSRDA ADLLRERDEE LADLSTKNVD PAVTAYVEED RKLFARGREL AERYQQYFEK
YLKGGPDFTP DPSRAVAHIG RGRQEIRKIL AEARKLEARA EMLRKEKSAE LEQELPPLHF
RLPELKQLLS SR