Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_7081 |
Symbol | |
ID | 8331302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 8228046 |
End bp | 8230340 |
Gene Length | 2295 bp |
Protein Length | 764 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644947508 |
Product | hypothetical protein |
Protein accession | YP_003104717 |
Protein GI | 256381057 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAAACGGC TGCTGTCCGT GCTGGCCGCG GTGTCGACGC TGCTCGTCGC GGGTGCGACC ACCGCGCCCG CGGCGAGCGC CGACTCCCCG GAGGCGGAAG CCCGCAGCAC CATCGGAGAA CCACCACCCG CGACCCAGGT CTGGGCCACG CGGGCGGTGT CGAAGCAAGG TCCGCAGCCG CAGACCTTCC TCAGGCTCGA TGTGGAGCAG CTCAGCCCGC GCGTGGTGAT GGCGGGCAGC AGCGACTCGG TCACGATCAG CGGCAAGGTC ACCAACGTCG GTGACCGCCT GCTGCGCGAC ATCGACCTGA GGCTGGAGCG CGGCAACGCG CTGACCAAGG AGGAGGAAGT TCGCACGGCG CTGCGCGAGG GCGCCGACTC CGAGGTCGAG CAGCCGCTGT TCACCAAGAT CGCCGACAAG CTGGAGCGCG GCGAGAGCAA GGACTTCACC CTGACCGTGC CGCTGCACGG CAACGACCCC AAGTCGCTGC GGGTGGACGA GCCCGGCATC TACCCGGTGC TGGCCAACAT CAACGGAACC CCGGACTTCG GCGGGCGGGC GCGGCTGGCC GCGCTCAGCA CGCTGCTGCC GGTCCTGACC GTCCCCGGCG GTTCGACGCA GAACGCGCCG GGCGGCGGTT CGAGGCTGAC GCTGCTGTGG CCGCTGGCCG ACCGGCCGCG CCTGGTCGAG CAGCTCCCCG GTGACCGGTC GGTGCTGACC GACGACGAGC TCGCGGCCTC GCTGGCGCGC GGCGGCAGGC TGTACGGCCT GCTGGAGGGC TACAAGTCGG CGCTGGACGG CGAGCTGACC GGGTCGGTCT GCCTGGCCGT CGACCCCGAC CTGCTGCGCA CCGTCAAGAT CATGTCCCAG GGCTACCAGG TGCGCGGCCT CGGCGCGGGC AAGGGCGCCG ACGACGCCAA GCTGTGGCTG GACCAGCTGC GCAGGCAGGT GTCCGGCAAG TGCGTGGTCG CGCTGGCCGA CGCGGACGCC GACCTGGTGG CGCTGAACCG CGCCGGGCTC GGCGACCTGG CCTCGAACGC GCTGACCGAG GGCGCGCAGG TGGTCGGCGA CGTGCTGGAG TCCCAGAAGC CGCTGCAGGG CGTGGTGTGG CCCGAGGACG GCGTCCTCGA CCAGGCCACC CTCGACCGGC TGACCGGCCA GGGCGTCACC GGCCTCGTGC TGGAGCAGCC CGCCGTCGCG GGCACGACGG GCACCGGTCC GGTGACCGTC GGCGGGGACA AGAAGGCCTC GGCCGCCCGC GTCGACACCA TGGTGTCCGA CGCGCTGGTC GGCTCGGCCA GCCCGATCGC GGGCGCCACC ACGGCCAGCA CCGAGCAGGC CGTGTCGGTG CAGAACGCGC TCGCGGCGCT GGCGTTCCGC ACCGGGTTCC AGGGCAACGA CCAGAACGTC GTGGTCGCCC CGCCCCGGCG GTGGAACGCC CCCGAGGGCG AGATCTCCAT GTTCCTGCAG ACGATGAAGT CGCTGGTGGC GGGCGGCTAC GCCAAGCCGG CGGGCCTGGA GTCGCTGCTG GACACCACGC CCGGCGGGCA GAGCGCGGCG CTGAGCTACC CGGTCGAGGC GGGCGCCACC GAGGTGTCCC CGGCGGTGAC CACCGAGCTG GCCCGTGCGT GGCGCGGCGT GCAGGACATC GCGTCCGCCA TGAGCCAGCA GGACGCCGAG GCCGCCAAGC CCGAGGACCT GGTGGCCCCG CTCCGGCTGG CGCTGCTGCG CGCGGCCTCC GGGGCGTGGC GCGGCGACGA GGCCGCGGCC CGGCGCGCGC TGACCATCGG CCTCGACCGC ATCGACGGCC TGGAGTCCCA GGTCACGGTG GCGGAGCCGG CCAGCCCGAT CCTGCTCGGC TCGGACAACA GCCCGCTGCC GGTGAACATC TCCAACAAGC TGGACGTGCG CGTCACGGTG CGGGTCGTCG TCGAGGACGT CCCCGGCGTC ACCGTGACGC AGATGCCGGA CCTGGTGCTG CCCGCGCGCG GCGCGCGCCA GGTCATGGTG CCGCTGGAGG CGCTGCGGTT CGGCAAGTTC AGCGTGCACG TGCGGCTGAC CACGCCGAAC GGCATCGAGC TGGGCGACCG CGCCCGGCTG GAGGTGTCCT CCAACTCCTA CGGGACCATC ACCATCGTCA TCACGGGCGC GGCGGCGGCG CTGCTCGTCC TGCTGTCCGG GCGCCGGATC TACCGGCGGG TGCGGGCGTC GCGGGCGGCG GCCGCGCAGG TGGCGAACGA GACCAAGCAC GAGGACCAGA TGCCGGCCAC GCCGGAGAAG TCGAGCGCGA GTTGA
|
Protein sequence | MKRLLSVLAA VSTLLVAGAT TAPAASADSP EAEARSTIGE PPPATQVWAT RAVSKQGPQP QTFLRLDVEQ LSPRVVMAGS SDSVTISGKV TNVGDRLLRD IDLRLERGNA LTKEEEVRTA LREGADSEVE QPLFTKIADK LERGESKDFT LTVPLHGNDP KSLRVDEPGI YPVLANINGT PDFGGRARLA ALSTLLPVLT VPGGSTQNAP GGGSRLTLLW PLADRPRLVE QLPGDRSVLT DDELAASLAR GGRLYGLLEG YKSALDGELT GSVCLAVDPD LLRTVKIMSQ GYQVRGLGAG KGADDAKLWL DQLRRQVSGK CVVALADADA DLVALNRAGL GDLASNALTE GAQVVGDVLE SQKPLQGVVW PEDGVLDQAT LDRLTGQGVT GLVLEQPAVA GTTGTGPVTV GGDKKASAAR VDTMVSDALV GSASPIAGAT TASTEQAVSV QNALAALAFR TGFQGNDQNV VVAPPRRWNA PEGEISMFLQ TMKSLVAGGY AKPAGLESLL DTTPGGQSAA LSYPVEAGAT EVSPAVTTEL ARAWRGVQDI ASAMSQQDAE AAKPEDLVAP LRLALLRAAS GAWRGDEAAA RRALTIGLDR IDGLESQVTV AEPASPILLG SDNSPLPVNI SNKLDVRVTV RVVVEDVPGV TVTQMPDLVL PARGARQVMV PLEALRFGKF SVHVRLTTPN GIELGDRARL EVSSNSYGTI TIVITGAAAA LLVLLSGRRI YRRVRASRAA AAQVANETKH EDQMPATPEK SSAS
|
| |