Gene Amir_7047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_7047 
Symbol 
ID8331268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp8188123 
End bp8189271 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content78% 
IMG OID644947476 
ProductExonuclease RNase T and DNA polymerase III 
Protein accessionYP_003104685 
Protein GI256381025 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGTTACG CGGTGGTCGA CGTGGAGACG ACCGGGTTCC GGCGGTCCGA CCGGGTGGTC 
GAGGTGGCCG TCGTGCAGCT GGACCGGGAC CGGCGGGTCA CCGGGGAGTG GTGCACGCTG
CTGAACCCCG GCCGGGACCT CGGACCGCAG CACGTGCACC GGATCAGGGC AGCCGACGTG
TGGGGCGCGC CGACGTTCGC GCTGGCGGCG GGGGCGCTCG CCCGGCGGTT GGCGGGTCGG
GTGCTGGTGG CGCACAACCT GGCGTTCGAC GCGCGCTTCC TGGCCGCCGA GTTCGGCCGG
GTCGGGGTGG ACGCGGACTT CGACGGGCTG TGCACGATGC GGCTGTCGGG CGGGCGGCGG
TCGCTGCGGG ACTGCTGCGC CGACGCCGGG GTGCCGCTGC TGGACGCGCA CTCGGCGCTG
GCCGACGCGC ACGCGGCGGC GGCGCTGTTC GCGCGGCTGC CCGAGGTCCC CGGCGCGGGC
GCGCTGGACC TGCCGCCGCT GGGCGCGGAC GTGCCCGAGG TGCGGCGGGG CGCCGCCGAC
CTGGCGGGTG GGGTGCTGGC GGGGACGGCG GGCGCCGGAC CGGCGGGAAT GGCGCCTGCG
GGAACGGCGC CGGCGGGCGG AGTTCCCGCG AGCGGGCTGC TGGCGGGCGC CGCCCCGCGG
TCGGGCGCGC TGGCCGGTGC GACGCGACCG GTCGAGCTGT CCGGCGGGAC TCTGGCCGGT
GGGACTCGGG CCGGTGGGAC GCGGTCGGGC GAAGTCCTGG CAGGCGGGGC TCTGGCGGGT
GGGTCGCTCG GCGGTCCGGC GATTGGTGTT GCGGCGACCG GTGTTCCGGG TGCCGGCGGT
CCGGCAGCCG GCGGCGCGGG GTCGGCGGTG CGGTTGGCGC GGGGCGACCT GGTGGTGTTC
ACCGGGCAGA TGGACGACGC GCGCGACGTG TGGGTGGGCC GGGCGCTGGG CTCGGGGCTG
CGGGTGAACT CCGGTTACGT CACGCGCGCC ACGGCGCTGC TGGTCGCGGC CGACCCGTTC
TCCCTGTCGA CCAAGGCGAG GCGGGCCCGC GCGTACGGGG TGCCGATCGT GTCCGAGGGC
GCGTTCGCCG CGCTGCTCGC CGGTCTCGCG GACGGGCTCC CCGACGAGCC GCTGGGCAAG
ATCAGCTGA
 
Protein sequence
MGYAVVDVET TGFRRSDRVV EVAVVQLDRD RRVTGEWCTL LNPGRDLGPQ HVHRIRAADV 
WGAPTFALAA GALARRLAGR VLVAHNLAFD ARFLAAEFGR VGVDADFDGL CTMRLSGGRR
SLRDCCADAG VPLLDAHSAL ADAHAAAALF ARLPEVPGAG ALDLPPLGAD VPEVRRGAAD
LAGGVLAGTA GAGPAGMAPA GTAPAGGVPA SGLLAGAAPR SGALAGATRP VELSGGTLAG
GTRAGGTRSG EVLAGGALAG GSLGGPAIGV AATGVPGAGG PAAGGAGSAV RLARGDLVVF
TGQMDDARDV WVGRALGSGL RVNSGYVTRA TALLVAADPF SLSTKARRAR AYGVPIVSEG
AFAALLAGLA DGLPDEPLGK IS