Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6984 |
Symbol | |
ID | 8331205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 8119338 |
End bp | 8120747 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644947414 |
Product | peptidase M20 |
Protein accession | YP_003104623 |
Protein GI | 256380963 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATCGAT CTGCGTTGAC CCGTACCGTC CGAAGCACCT GGGACGAGGA CGTCCTGCCC AGCCTGACCG GGCTCGTCGC CGTGCCCGCC GTCTCCCCGG CGTTCGACCC GGACTGGGAG GCGAGCGGCC ACCTCGACGC CGCCGTCGAG CACGTGCGCG CCTGGCTCGC CACCCGCGAC CTGCCCGGCG CGCAGGTGGA GGTGGTCCGC CTGCCGGGAC GCACCCCGCT GCTCCTGGTG GACGTGCCCG CCACGGCGGG TGACGACACC GTGCTGCTCT ACGGCCACCT CGACAAGCAG CCGCCGGTCG CCAACTGGTC CGAGGGCCTG GCCCCGTGGA CCCCGGTCGT GCGCGACGGC AGGCTCTACG GCCGGGGCTC GGCCGACGAC GGCTACTCCG GCTACGCGGC CGTCACCGCC ATCGAGGCGG TGCGCGCGGC CGGTGGGCAG CACGCCCGGT GCGTGCTGCT GCTGGAGACC AGCGAGGAGT CCGGCAGCCC CGACCTGCCC GCCTACCTGG AGCACCTCAC GCCGCGCCTG GGCGACGTGT CGCTGGTCGT GTGCCTGGAC TCGGGCGGCA ACGACTACGA GCGGATGTGG CTGACCACCT CGCTGCGCGG CCTGGTGCAG GTCGCCATGA CCGTGCGCGT GGTCGAGGGC GGCCTGCACT CCGGCATGGC CAGCGGCATC GTGCCCAGCT CGTTCCGGAT CGCCAGGCAG CTGCTCGACC GGCTGGAGGA CTCGGCCACC GGCGAGATCC AGCTCATGGA GATGCACGTC GACGTGCCGG AGAACCGGGT CGACGAGATC CGCGAGGCCG TGGCCGCCGC GCCGGGCTCG CTGACCGGGG CCGTGCCGTG GGCGGGCGGC ACCCAGCCGG TGGACGGGGA CGAGGTGCAG TTGGCGCTCA ACAACGGCTG GCGGCCGACC CTGTCGATCA CCGGCGCGGA CGGCCTGCCC AAGCCGGAGG ACGCGGGCAA CGTGCTGCGC CCCTCCACCA CGCTGGTGCT CAGCTTCCGG CTGCCGCCGA CCGCCGACTC GGCCGCGGCG CTGGCCGCCG TGGAGCGCGC GCTGACCACC GACGTGCCGT ACGGCGCGGT GGTGGAGCTG TCGCGCACCG AGCACGCGAC CGGCTGGAAC GCGCCGGAGC TGGCCCCGTG GCTGCGCGAG TCGCTGGACC GGGTGGGCGC GGACGTGTTC GGCTCGCCGT GGCGGACGGT GTCGCTGGGC GGGTCGATCC CGTTCATGGG CCTGCTGCAC GAGGCGTACC CGGCGGCGCA GTTCCTGGTG ACCGGCGCGG TCGGCCCGGA CAGCAACTGC CACGTGCCCG ACGAGTGGCT GAACCTGGCG CACGCCGCGC GGATCACCGA GGCCGTCGCG GTCGTGCTGG ACGCCCACAC CCGCAGGTGA
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Protein sequence | MDRSALTRTV RSTWDEDVLP SLTGLVAVPA VSPAFDPDWE ASGHLDAAVE HVRAWLATRD LPGAQVEVVR LPGRTPLLLV DVPATAGDDT VLLYGHLDKQ PPVANWSEGL APWTPVVRDG RLYGRGSADD GYSGYAAVTA IEAVRAAGGQ HARCVLLLET SEESGSPDLP AYLEHLTPRL GDVSLVVCLD SGGNDYERMW LTTSLRGLVQ VAMTVRVVEG GLHSGMASGI VPSSFRIARQ LLDRLEDSAT GEIQLMEMHV DVPENRVDEI REAVAAAPGS LTGAVPWAGG TQPVDGDEVQ LALNNGWRPT LSITGADGLP KPEDAGNVLR PSTTLVLSFR LPPTADSAAA LAAVERALTT DVPYGAVVEL SRTEHATGWN APELAPWLRE SLDRVGADVF GSPWRTVSLG GSIPFMGLLH EAYPAAQFLV TGAVGPDSNC HVPDEWLNLA HAARITEAVA VVLDAHTRR
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