Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6801 |
Symbol | |
ID | 8331020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 7934976 |
End bp | 7935803 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644947232 |
Product | extracellular solute-binding protein family 3 |
Protein accession | YP_003104443 |
Protein GI | 256380783 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTTACC GGAAGCTGGT CATGGCGATC ACGGGGTCTG CGGTCCTGGC GGCGACGGCC GCCTGCGGGA GCGCGGACCA GAGCACCCTG GAGGGCAAGG CGGACGACGG CGCCCTCACC ATCGGCATCC GCTACGACCT GCCCGGCATG TCCCAGCGGC GGATCGACGG CGAGTTCGTC GGCTTCGACG TCGACGTGGC CAAGTACGTC GCCGCGCAGT TCGACGTGCA GCCCGCGGGC ATCACCTGGC GCGAGGTCCG GCCCGCCGAC CGCGAGAAGC TGATCGCCTC CGGCGAGGTC GACCTGGTGG TCGCGAACTA CTCGATCACC GAGCCGCGCA AGCAGCAGGT GGGCTTCGCG GGTCCGTACT TCCAGACCGG GCAGGGCCTG CTGGTCCGCG CGACCGAGGA GGCCATCACC GGCACCGAGG CGCTCAGCGG GAAGAAGCTG TGCTCGGTGA CCGGCACGAC CTCGGCGGCG AAGGTCAAGG AGGAGTTCGC GCAGGACGTC GAGCTGGTCG AGTACGGCCA GTACTCGGAC TGCGTGACCG CCCTGCTCGC GGAGAAGGTC GACGCCGTGA CCACGGACGA GGCCATCCTG ACCGGCTTCG TCGGGCAGAA CCCGGAGCTG CTCAAGCTCG TCGGCGAGCC CTTCACCACC GAGCGCTACG GCATCGGCCT GGCCAAGGAC GACGCCGCGG GCAGGGGCAA GGTGGCCTCG GCGATCGAGA AGATGGTGAG CACCGGGGAG TGGAAGGCGG CGCTGGACCG CAACCTCGGC AGCGCGGAGA TCGCCCTGCC CGAGCCGCCC GCGGTCACCG AAAAGTGA
|
Protein sequence | MRYRKLVMAI TGSAVLAATA ACGSADQSTL EGKADDGALT IGIRYDLPGM SQRRIDGEFV GFDVDVAKYV AAQFDVQPAG ITWREVRPAD REKLIASGEV DLVVANYSIT EPRKQQVGFA GPYFQTGQGL LVRATEEAIT GTEALSGKKL CSVTGTTSAA KVKEEFAQDV ELVEYGQYSD CVTALLAEKV DAVTTDEAIL TGFVGQNPEL LKLVGEPFTT ERYGIGLAKD DAAGRGKVAS AIEKMVSTGE WKAALDRNLG SAEIALPEPP AVTEK
|
| |