Gene Amir_6801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6801 
Symbol 
ID8331020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7934976 
End bp7935803 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content70% 
IMG OID644947232 
Productextracellular solute-binding protein family 3 
Protein accessionYP_003104443 
Protein GI256380783 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTACC GGAAGCTGGT CATGGCGATC ACGGGGTCTG CGGTCCTGGC GGCGACGGCC 
GCCTGCGGGA GCGCGGACCA GAGCACCCTG GAGGGCAAGG CGGACGACGG CGCCCTCACC
ATCGGCATCC GCTACGACCT GCCCGGCATG TCCCAGCGGC GGATCGACGG CGAGTTCGTC
GGCTTCGACG TCGACGTGGC CAAGTACGTC GCCGCGCAGT TCGACGTGCA GCCCGCGGGC
ATCACCTGGC GCGAGGTCCG GCCCGCCGAC CGCGAGAAGC TGATCGCCTC CGGCGAGGTC
GACCTGGTGG TCGCGAACTA CTCGATCACC GAGCCGCGCA AGCAGCAGGT GGGCTTCGCG
GGTCCGTACT TCCAGACCGG GCAGGGCCTG CTGGTCCGCG CGACCGAGGA GGCCATCACC
GGCACCGAGG CGCTCAGCGG GAAGAAGCTG TGCTCGGTGA CCGGCACGAC CTCGGCGGCG
AAGGTCAAGG AGGAGTTCGC GCAGGACGTC GAGCTGGTCG AGTACGGCCA GTACTCGGAC
TGCGTGACCG CCCTGCTCGC GGAGAAGGTC GACGCCGTGA CCACGGACGA GGCCATCCTG
ACCGGCTTCG TCGGGCAGAA CCCGGAGCTG CTCAAGCTCG TCGGCGAGCC CTTCACCACC
GAGCGCTACG GCATCGGCCT GGCCAAGGAC GACGCCGCGG GCAGGGGCAA GGTGGCCTCG
GCGATCGAGA AGATGGTGAG CACCGGGGAG TGGAAGGCGG CGCTGGACCG CAACCTCGGC
AGCGCGGAGA TCGCCCTGCC CGAGCCGCCC GCGGTCACCG AAAAGTGA
 
Protein sequence
MRYRKLVMAI TGSAVLAATA ACGSADQSTL EGKADDGALT IGIRYDLPGM SQRRIDGEFV 
GFDVDVAKYV AAQFDVQPAG ITWREVRPAD REKLIASGEV DLVVANYSIT EPRKQQVGFA
GPYFQTGQGL LVRATEEAIT GTEALSGKKL CSVTGTTSAA KVKEEFAQDV ELVEYGQYSD
CVTALLAEKV DAVTTDEAIL TGFVGQNPEL LKLVGEPFTT ERYGIGLAKD DAAGRGKVAS
AIEKMVSTGE WKAALDRNLG SAEIALPEPP AVTEK