Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6747 |
Symbol | |
ID | 8330963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 7879996 |
End bp | 7881438 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644947176 |
Product | hypothetical protein |
Protein accession | YP_003104390 |
Protein GI | 256380730 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.232183 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCGAG AGAGCGAGTC GGAGCAGACC ACGCGCACGG TCGCGGAGCT GCTTGCCCAG TACGGCGGCA AGGCGGGGGA AGACGCCAAG CCCCGCAGGA GGCGCCGCCG CGCGGAGGAA GACGCCTCGG AGACCACGGG ACCGCAGGCG ATAATCGACC GCGTCTCGAC GGACAGCGCC CGCATGGCGC CGGTCCGCGA GGAGGACGTG CCGGAGGCGC CGCCCCCCGC GCCGCCGCGC GCGGCGCCGG GGCTGCCGCA GCGCCCGCCC CGGCGTCAGC CGCAGCCGCC GGTCGAGGAG CACGCCCCCT ACCAGGAGGA GCGCGGCTAC CAGGACGAGC GCGCGGGCTA CGACGAGCGG GCCGGGTACG ACGAGCGCGG TCACCAGGAC GAGCAGCGCG GCTACCAGGA GGAGCGCACC ACCTACCAGC CTCCGGTCGC GCCCCTGCCG CCCCCGCCGG TCGCCCCTCC GCCGCCGGTG CGACGCGGTC CCGCCGTCGA CCCGGCCGAG GAGACCCGCG TGGTCCCCCC GATCGTCGAC GACGAGCCCC CGCCGCCGCC CCCCATGCCC GCGTCCCGGC GCGCCCGCAA GCAGGCGCAG GCCGAGGCGC AGCGCGTGGC CGAGCGCACC GCGCTGGAGC GCCCCGTGGC CGACCGGCTC GGTGGCGCCC CCCCGGCGTC GGCCGAGGCG ACCCAGCTGG ACATGCAGGG CGTCGAGGCG CCCGAGCGAC CCGTCGACCG GCTGAACCCG GCCGCCAGGC CGCCCGCCCC CGGACGGCCG GGCGCGCCGC CGCGCGAGGC GGTCACCGAG ATCCTGCCGA GGGTCCCCGA CCAGCTGGTG CCGAACGTGC CGCTGGAGTC GATGCCGACC GAGTCGGTGC TGATCGTGCC GCCCGCGCCC TCGCGGATGC CCGAGCCGCT GCCCGACCAG ACCTCCGAGG ACTGGTTCGG CGACGCGCTC GACTCGGACA CCCCGCCCGG CGCGCCCAAG CCCCCGCAGG GCGGCGACGC GCAGCTCCAG CAGGGCACCG AGTTCCACGA GCTCGTGGAC GAGGACGACG AGGTCGACCC CGACGACGAG CCGAGGCCCA AGAAGGCCAA GAAGGCGCGC AAGGCCGCGT CCGACGGCCC GGCGGGCCTG TCCGACGTGG ACGAGCTGGA CGAGGACGAG GCCCCGCGCT CGCCCGCCAA GGAGTGGCTG GTCATGATCG GCCAGCTCGC CGTCGGCGTG GTCGGCGGCG CGGCGCTGTG GCTCGGGTTC AGCTTCCTGT GGCGCACCCT CGCGCCCGCC GCGCTCGTCG TCGCGCTGGC CGTCACGGTC GGCCTCGTGC TGCTGGTGCG CCGCATCCGC CGCGCCGACG ACCTGGGCAC CACGGTGCTC GCGGTCCTGG TCGGCCTGAT CGTCACGGTG TCCCCCGCGG CGATGCTGCT GGTGAAGTCG TGA
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Protein sequence | MSRESESEQT TRTVAELLAQ YGGKAGEDAK PRRRRRRAEE DASETTGPQA IIDRVSTDSA RMAPVREEDV PEAPPPAPPR AAPGLPQRPP RRQPQPPVEE HAPYQEERGY QDERAGYDER AGYDERGHQD EQRGYQEERT TYQPPVAPLP PPPVAPPPPV RRGPAVDPAE ETRVVPPIVD DEPPPPPPMP ASRRARKQAQ AEAQRVAERT ALERPVADRL GGAPPASAEA TQLDMQGVEA PERPVDRLNP AARPPAPGRP GAPPREAVTE ILPRVPDQLV PNVPLESMPT ESVLIVPPAP SRMPEPLPDQ TSEDWFGDAL DSDTPPGAPK PPQGGDAQLQ QGTEFHELVD EDDEVDPDDE PRPKKAKKAR KAASDGPAGL SDVDELDEDE APRSPAKEWL VMIGQLAVGV VGGAALWLGF SFLWRTLAPA ALVVALAVTV GLVLLVRRIR RADDLGTTVL AVLVGLIVTV SPAAMLLVKS
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