Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6683 |
Symbol | |
ID | 8330899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 7820237 |
End bp | 7821517 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644947112 |
Product | geranylgeranyl reductase |
Protein accession | YP_003104326 |
Protein GI | 256380666 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00871957 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACTC CCAGCCGCCG CAGGGCGGAC GAGGACGCCG AAGTGATCGT GGTCGGCGCG GGTCCCGCGG GCTCGACCGC CGCCACCTAC CTGGCGCGGG CAGGTCTCGA CGTGCTGCTC CTGGAGAAGG GCAGCTTCCC CCGCGAGAAG GTCTGCGGGG ACGGGCTGAC CCCGCGCGGC GTCAAGCAGC TGATCGACCT CGGCATCGAC ACCCGCGAGG AGGCGGGCTG GCTGCACAAC AAGGGCCTGC GCGTGGTCGG CGGCGGGGTC ACCATGGAGC TGGCCTGGCC CGAGCTGGCC TCGTTCCCGC CCTACGGCGT GGTGCGGCCC CGGCAGGACT TCGACGACAT GCTGGCCAAG GCCGCCGTCG AGGCGGGGGC GCGGCTCAAG GAGAACAACA ACGTCACCGG CGCGGTCGTC GAGCGCGGCC GGGTGGTGGG CGTGACGGCC AAGGTCGGCA AGGACAAGGA GCCGGTCACC TACCGCGCGC CGCTGGTCCT GGCCTGCGAC GGCGTGTCCG CGCGTCTGGC GCTGTCGGTG GGCCTGCAGA AGGACGACGC GAAGCCGATG GGCGTCGCGG TGCGCCGCTA CTACGCGAGC CCCCGCACCA AGGACGACCA CCTGGAGTCG CACCTGGAGC TGTGGGACCG CAAGAACAAC GTGCTGCTCC CCGGCTACGG CTGGATCTTC GGGATGGGCG ACGGCACGGT CAACGTCGGC CTGGGCATCC TGAGCACCTC CAAGGCGTAC GGCACCACGG ACTACCGCGC GCTGCTCAAG TCCTGGCTGG ACGGCACCCC CGAGGAGTGG GGCTTCCGCG AGGAGAACGC CACCAGCCGC ATCGGCGGCG CCGCCCTGCC CATGGGCCTG AACCGCAAGC CGCACTACAG CAACGGGCTG CTGCTGGTCG GCGACGCCGG CGGCATGGTC AACCCGTTCA ACGGCGAGGG CATCGGCTAC GCCATGGAGT CCGCCAAGAT CGCCGCGGAG ACCGTCGTGC AGGCCATGGC CAGGCCGGAC GGCCCCAGCC GGGAGCGCGC GCTGCACGGC TACCCGGTGC GCATCGAGCA GGCGCTGGGC AGCTACTACC GGCTCGGGAA CATCTTCAGC AAGCTCATCG GCAACCCCAC GATCATGAGC ACCGCGACCA AGTACGGACT TCCGCGCAAG GGCCTTATGA AACTTGTGCT GAAGCTGCTC GCTGGGCTAT ACGACCCGAA GGACGGGGAC GCTTTCGACC GCGTCATCAC GGCGGCGACG AAGATGGCTC CAACGGCTTA A
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Protein sequence | MTTPSRRRAD EDAEVIVVGA GPAGSTAATY LARAGLDVLL LEKGSFPREK VCGDGLTPRG VKQLIDLGID TREEAGWLHN KGLRVVGGGV TMELAWPELA SFPPYGVVRP RQDFDDMLAK AAVEAGARLK ENNNVTGAVV ERGRVVGVTA KVGKDKEPVT YRAPLVLACD GVSARLALSV GLQKDDAKPM GVAVRRYYAS PRTKDDHLES HLELWDRKNN VLLPGYGWIF GMGDGTVNVG LGILSTSKAY GTTDYRALLK SWLDGTPEEW GFREENATSR IGGAALPMGL NRKPHYSNGL LLVGDAGGMV NPFNGEGIGY AMESAKIAAE TVVQAMARPD GPSRERALHG YPVRIEQALG SYYRLGNIFS KLIGNPTIMS TATKYGLPRK GLMKLVLKLL AGLYDPKDGD AFDRVITAAT KMAPTA
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