| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6639 |
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| Symbol | rplA |
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| ID | 8330851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 7774640 |
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| End bp | 7775356 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644947064 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_003104282 |
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| Protein GI | 256380622 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGCA GCAAGGCGTA CAAGAACGCC GCCGAGCTGG TGGACCGGGA GCGGCTGTAC
TCGCCGCTGG AGGCCGCCAA GCTCGCCAAG GAGACCTCCA AGGTGAAGCT GGACGCGACC
GTCGAGGTCG CCATCCGGCT GGGCGTCGAC CCCCGCAAGG CCGACCAGAT GGTCCGCGGC
ACCGTGAACC TGCCGCACGG TACGGGCAAG ACCGCCCGCG TGATCGTCTT CGCCACGGGT
GACAAGGCCG CCGAGGCCGA GGCCGCCGGT GCGGACGCGG TCGGCACCGA CGAGCTGATC
GCCCGCATCC AGGGCGGCTG GCTGGACTTC GACGCCGCGA TCGCGACGCC GGACCAGATG
GCCAAGGTCG GCCGCATCGC CCGCATCCTC GGCCCGCGTG GCCTGATGCC GAACCCGAAG
ACCGGCACCG TGACCCCCGA GGTCAGCAAG GCCGTGACGG ACATCAAGGG CGGTAAGATC
AACTTCCGCG TCGACAAGCA GGCGAACCTG CACCTCGTCA TCGGCAAGGT GTCGTTCGAC
CCGGAGAAGC TGGTCGAGAA CTACGCCGCC GCGCTGGACG AGATCCTGCG TGCCAAGCCC
TCCGCCGCGA AGGGCCGGTA CGTCAAGAAG GTGACCGTCT CGACGACGAT GGGCCCCGGC
ATCCCCGTGG ACCCGAACCG CACGCGCAAC CTGCTCTCGG ACGAGGCCGC CGTCTGA
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| Protein sequence | MKRSKAYKNA AELVDRERLY SPLEAAKLAK ETSKVKLDAT VEVAIRLGVD PRKADQMVRG
TVNLPHGTGK TARVIVFATG DKAAEAEAAG ADAVGTDELI ARIQGGWLDF DAAIATPDQM
AKVGRIARIL GPRGLMPNPK TGTVTPEVSK AVTDIKGGKI NFRVDKQANL HLVIGKVSFD
PEKLVENYAA ALDEILRAKP SAAKGRYVKK VTVSTTMGPG IPVDPNRTRN LLSDEAAV
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