Gene Amir_6608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6608 
Symbol 
ID8330820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7743225 
End bp7744052 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content71% 
IMG OID644947034 
Productribosomal protein S3 
Protein accessionYP_003104252 
Protein GI256380592 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0092] Ribosomal protein S3 
TIGRFAM ID[TIGR01009] ribosomal protein S3, bacterial type 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGTCAGA AGATCAACCC GCACGGCTTC CGGCTGGGGA TCACCACCGA CTGGAAGTCC 
CGCTGGTACG CCGACAAGCA GTACGCCGAG TACGTGGCCG AGGATGTCAA GATCCGCAAG
CTGCTCTCGC GCGGCATGGA GCGTGCCGGC ATCTCCAAGG TGGAGATCGA GCGCACCCGT
GACCGGGTCC GCGTCGACAT CCACACCGCC CGGCCGGGCA TCGTCATCGG CCGTCGCGGC
GCGGAGGCCG ACCGCATCCG CGGTGAGCTG GAGAAGCTCA CCAAGAAGCA GGTGCAGCTC
AACATCCTCG AGGTGAAGAA CCCCGAGTCG GACGCGCAGC TCGTGGCGCA GGGCGTCGCC
GAGCAGCTGT CCAACCGCGT CGCCTTCCGC CGCGCGATGC GCAAGGCCAT CCAGTCGGCC
ATGCGCTCCT CGCAGGTGAA GGGCATCCGC GTGCAGTGCG GCGGTCGCCT CGGCGGCGCC
GAGATGTCCC GCTCGGAGCA CTACCGCGAC GGCCGCGTGC CGCTGCACAC GCTCCGCGCC
GACATCGACT ACGGCTTCTT CGAGGCCCGC ACCACGTTCG GTCGCATCGG CGTCAAGGTG
TGGATCTACA AGGGCGACGT GGTCGGTGGC ATCAGCGCCA AGCGCGAGCG CGACGCGGCC
CCCTCGGCCG AGCGCGCGCC CCGGCGCGAC CGCGGTGACC GCCCGAACCG GGCCCGTCGC
TCCGGTGCCA GCGGCACCAC CGCGACGAGC ACCGAGGCCG GTCGTGCCGC TGCTGACGCA
CAGGCCAGCG ACAAGCCGGC CGCGACCGAA GAGAAGACGG AGGGCTGA
 
Protein sequence
MGQKINPHGF RLGITTDWKS RWYADKQYAE YVAEDVKIRK LLSRGMERAG ISKVEIERTR 
DRVRVDIHTA RPGIVIGRRG AEADRIRGEL EKLTKKQVQL NILEVKNPES DAQLVAQGVA
EQLSNRVAFR RAMRKAIQSA MRSSQVKGIR VQCGGRLGGA EMSRSEHYRD GRVPLHTLRA
DIDYGFFEAR TTFGRIGVKV WIYKGDVVGG ISAKRERDAA PSAERAPRRD RGDRPNRARR
SGASGTTATS TEAGRAAADA QASDKPAATE EKTEG