Gene Amir_6582 details

Gene Information

• Locus tag: Amir_6582
• ID: 8330794
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: -
• Start bp: 7729232
• End bp: 7729822
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 644947008
• Product: ribosomal protein L17
• Protein accession: YP_003104226
• Protein GI: 256380566
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0203] Ribosomal protein L17
• TIGRFAM ID: [TIGR00059] ribosomal protein L17

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.252016
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCACCC CCACCAAGGG ACCCCGTCTC GGTGGCTCGC CGGCCCACGA GCGGCTCATG 
CTGGCCAACC TGGCCACGTC GCTGTTCACC CACGGTCGCA TCACCACGAC CGAGGCGAAG 
GCCAAGCGGC TGCGCCCGTA CGCCGAGAAG CTGATCACCA AGGCCAAGGT CGGTGACCTG 
CACAACCGTC GCGAGATCAT GAAGGTGATC CGCGACAAGG ACATCGTCCA CAAGCTGGTG 
GCCGAGATCG GTCCGTTCTT CGCGGACCGC TCCGGCGGCT ACACCCGCAT CACGAAGACG 
CTGAACCGCA AGGGCGACAA CGCCCCCATG GCCGTCATCG AGCTGGTGCA GCAGAAGACG 
GTGACCTCCG AGGCCGAGAA GGCGCGGAGC ACCAAGTTCG CCAAGGACGA GGCCAAGACC 
GAGGCTCCCG CCGAGGAGAC CAAGGTCGAG GAGGCCAAGG CCGTCGACCA GGACGCCGAG 
GCCCCCGAGT CCGCCACCAA GGACGCGTCC GAGGAGCCCG CCGAGGGCGC CGAGGCCAAG 
TCCGAGGAGG GCACCGCGGC CAAGGCCGAG GACAAGAAGG ACGAGTCCTG A 

 

Protein sequence

MPTPTKGPRL GGSPAHERLM LANLATSLFT HGRITTTEAK AKRLRPYAEK LITKAKVGDL 
HNRREIMKVI RDKDIVHKLV AEIGPFFADR SGGYTRITKT LNRKGDNAPM AVIELVQQKT 
VTSEAEKARS TKFAKDEAKT EAPAEETKVE EAKAVDQDAE APESATKDAS EEPAEGAEAK 
SEEGTAAKAE DKKDES