| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6434 |
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| Symbol | |
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| ID | 8330645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 7535679 |
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| End bp | 7536518 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644946862 |
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| Product | helix-turn-helix domain protein |
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| Protein accession | YP_003104081 |
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| Protein GI | 256380421 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.147514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCGCC AGGGGGCTTC GTTCCGGCAA CGGCGGGTAT CTGCCGAGCT GCGAGCGCTG
CGGATCGAAC GTGGGGTGAG CTGCGCGGAG GTGGCGCAGG CCATCGGGGT GTCGGAGAGC
AAGATCAGCC GGATGGAGAC GGGCAAGCGC GGGCTGTACG CCTACGACGT CGCCGCCATC
CTGGGGTTCT TGCAGGCGCC GCAGAAGCTG CGAGACGATC TGATCGAACT CGTGCAGGCC
GGAGAAACCC GGAACTGGCA CTTCGTTCGC CAGAGCAACA GGGTGCCGCC GCAGTGGAAG
GACCTGCTCG AACTTGAACA GCAGGCATCG GCGCTCTACA ACTACGAAAC GATGATCGTC
CCCGGTCTGG CCCAGACTGC CGAGTACACG CGGGGAATCC TCAGCGTCAG CGATGCCATC
CAGGAGCACG AACTGGAAGC TCTGGTTGCC ATGCGCCTGG GACGGCAGTC GGTCATCGGC
CGCATCTTCT TGCACCTGAT ACTGGACGAG AGCGTGCTGA TGCGGAAATT CGGCGACCCG
GTGATGATGC ACGCGCAGTT GCGACACCTG GTGGCCATGA GCAGCAGGAA CAAGGTGACC
ATCCAGGTGC TCCCCTTGAA CAGCGTCATG CACCCCGGGC TCAACGGGCC GTTCATGCAC
CTGGAGTTCA CCGACCAGCC GGGCCTGGTC TACATCGAGG GCAGGGACAG CCACAGCTTC
CTGGAGGAGG ACGTGCACCT CGACAACGCC AAGTCAGCCT GGCGCAAACT CCTCGCGCTG
GCACTACCGC CCGAAGCCTC GGCAGCGTTG ATCGACGAGC ACGCGAGCAA GCTGATCTGA
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| Protein sequence | MTRQGASFRQ RRVSAELRAL RIERGVSCAE VAQAIGVSES KISRMETGKR GLYAYDVAAI
LGFLQAPQKL RDDLIELVQA GETRNWHFVR QSNRVPPQWK DLLELEQQAS ALYNYETMIV
PGLAQTAEYT RGILSVSDAI QEHELEALVA MRLGRQSVIG RIFLHLILDE SVLMRKFGDP
VMMHAQLRHL VAMSSRNKVT IQVLPLNSVM HPGLNGPFMH LEFTDQPGLV YIEGRDSHSF
LEEDVHLDNA KSAWRKLLAL ALPPEASAAL IDEHASKLI
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