| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6364 |
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| Symbol | |
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| ID | 8330575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 7455630 |
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| End bp | 7456826 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644946792 |
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| Product | integrase family protein |
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| Protein accession | YP_003104011 |
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| Protein GI | 256380351 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGACACG TCCAAGATCG CTGGTGGAAA GAGGAGATCG ACCCCGCGAC CCAGAAGGTC
ACCAGGATCA AGACCTCCTC CTACGGAAAA GGTCTGCGCT ACAAGGCCCG CTATCTCGAC
CCACAGGGGA ACGAGAAAAG CAAGAGTTTT CCAGACCGCC AGAAAAAGCG GGCCGATGAC
TTCCTGTTGG AGGTCGAGTC TGACAAGCGA GAAGGCAAGT ACGTCAGCCC TAGCGCAGGT
AGGCGCAAGT TCAAGGAGCA AGCAGAGAAC TGGATCAAGA GCCAGTCGTC GGACGCAGCG
TCCCGCGAAG CGATCCAGAG CCGACTGGAC AGCCACATCA ATCCACACTT CGGCAACCTA
CCGGTGGGAA AGATCAAGCC TGCGACGGTG CGGGACTGGC TCGGCCTGCT TGACGCGGAA
CGGCTGAGCG AGAACTACAA GACCGTGCTG TTCACCACCG TGTCCTCGGT ACTGGATTCG
GCCGTGGAAG ATCGGCTGAT CATCGAGAAC CCGTGCAAAG CCAAGACGAT CAAACGCCCG
ACCTCGATCA GCCCCGACAT CGCCGTATGG CCGGAGGAAA GGGTTCTCGA ACTCGAAGGA
TCAATCGAAC CGCGCTTCGC GATCGTCTGC CCCCTCGGCG CTGGCTGCGG CCTACGGCAA
GGCGAAATTC TCGCCCTCTC CCCCGATGAC GTCGACGAGG AGAGGATGCT CCTGATCGTT
CAGCGCCAGT TGCGGGTGGT CGGGCGACGA CTCGTCTTCG CGCCCCCCAA AGGGGGCAAG
CGCAGGACTG TTCCTCTGGC GTCCGGCGTG CTCCGGGCGA TTCGGGAGCA CGAAAAGCTA
TTCCCCTCCG CAGAGGTGAC CTTGCCGTGG AAGACCCCGG AAGGCGTCCC CACGACGGCG
CGACTCCTCG CCACCGGGCC GAACGGGCGT GTCTACACCG GCGACCTGTT CCACAAGGTC
GTCTGGCTCG GCGCGTTCAG GGAGGCCGGA CTCATCTACC GGAACCGGGC GGACGGGATG
CACGCGCTGA GGCACTTCTA TGCCTCCACG CTGCTGTCAC GGGGCGTGTC GGTCAAGGAG
TTGGCGGAGT ACCTGGGGCA CTCCGACCCC GGCTTCACAC TCCGGACCTA CACGCACCTC
GTCCCATCCA GCCATGAGCG AGCCAGGGAA GCGATCAATG CAGTTTTCAC ATCTTAA
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| Protein sequence | MGHVQDRWWK EEIDPATQKV TRIKTSSYGK GLRYKARYLD PQGNEKSKSF PDRQKKRADD
FLLEVESDKR EGKYVSPSAG RRKFKEQAEN WIKSQSSDAA SREAIQSRLD SHINPHFGNL
PVGKIKPATV RDWLGLLDAE RLSENYKTVL FTTVSSVLDS AVEDRLIIEN PCKAKTIKRP
TSISPDIAVW PEERVLELEG SIEPRFAIVC PLGAGCGLRQ GEILALSPDD VDEERMLLIV
QRQLRVVGRR LVFAPPKGGK RRTVPLASGV LRAIREHEKL FPSAEVTLPW KTPEGVPTTA
RLLATGPNGR VYTGDLFHKV VWLGAFREAG LIYRNRADGM HALRHFYAST LLSRGVSVKE
LAEYLGHSDP GFTLRTYTHL VPSSHERARE AINAVFTS
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