Gene Amir_6269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6269 
Symbol 
ID8330480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7357480 
End bp7358211 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content75% 
IMG OID644946700 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003103919 
Protein GI256380259 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCTTCG CTGACGCGCT GGAGTGGCTG CTCTCGCCCG CGAACTGGTC CGGGCCCACC 
TCGATCCCGA CGCGGGTCGG CGTGCACCTG CTGTACTGCC TGGCCGCCGT GCTCGGCGCG
AGCGCGATCG CGGTGCCGCT GGGCCTGTGG ATCGGGCACA CCGGGCGCGG CGGGACGGTG
CTGGTCGCGG GCGGCAACGC GCTGCGGGCG CTGCCCACGC TCGGCCTGGT CACCCTGCTG
TACCTGCTGC TCGGCGGCGG GCAGGCCGGG GTCGTGATCG CGCTGATCGT GCTGGCCATC
CCGCCGCTGC TCGCCGGCGC GTACGCCGGG GTGCAGGACG TGGACCGGGG CGTCGTGGAC
GCCGCGCGCG GCATGGGCAT GACCGGCTCG CAGGTGCTGT GGCGGGTCGA GCTGCCGAAC
GCGCTGCCGC TGCTGCTCGG CGGGGTGCGC AACGCCACCC TGCAGGTCGT GGCGACCGCG
TCGGTGGCCG CGTACGTGGG GATCGAGACG CTGGGCCGTC CGCTGCTGGA CGGTTTGCGG
GTGCTGGACT ACGGGCAGTT CGTCGGCGGC GCGGTGCTCA TCGCCCTGCT GGCGGTCGCG
CTCGACCTGC TGCTGGCGGG GGTGGGAAGG CTCCTCGTGC CCAAGGGCCT CACCCTCGGC
ACGCGGCGTC GCAAGGGGAA GCTGTCGGCG ACCGCCGCCG CGCAGCGCGA AGTGAGGGGA
AGCAAGGCAT GA
 
Protein sequence
MIFADALEWL LSPANWSGPT SIPTRVGVHL LYCLAAVLGA SAIAVPLGLW IGHTGRGGTV 
LVAGGNALRA LPTLGLVTLL YLLLGGGQAG VVIALIVLAI PPLLAGAYAG VQDVDRGVVD
AARGMGMTGS QVLWRVELPN ALPLLLGGVR NATLQVVATA SVAAYVGIET LGRPLLDGLR
VLDYGQFVGG AVLIALLAVA LDLLLAGVGR LLVPKGLTLG TRRRKGKLSA TAAAQREVRG
SKA