Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6269 |
Symbol | |
ID | 8330480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 7357480 |
End bp | 7358211 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644946700 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003103919 |
Protein GI | 256380259 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCTTCG CTGACGCGCT GGAGTGGCTG CTCTCGCCCG CGAACTGGTC CGGGCCCACC TCGATCCCGA CGCGGGTCGG CGTGCACCTG CTGTACTGCC TGGCCGCCGT GCTCGGCGCG AGCGCGATCG CGGTGCCGCT GGGCCTGTGG ATCGGGCACA CCGGGCGCGG CGGGACGGTG CTGGTCGCGG GCGGCAACGC GCTGCGGGCG CTGCCCACGC TCGGCCTGGT CACCCTGCTG TACCTGCTGC TCGGCGGCGG GCAGGCCGGG GTCGTGATCG CGCTGATCGT GCTGGCCATC CCGCCGCTGC TCGCCGGCGC GTACGCCGGG GTGCAGGACG TGGACCGGGG CGTCGTGGAC GCCGCGCGCG GCATGGGCAT GACCGGCTCG CAGGTGCTGT GGCGGGTCGA GCTGCCGAAC GCGCTGCCGC TGCTGCTCGG CGGGGTGCGC AACGCCACCC TGCAGGTCGT GGCGACCGCG TCGGTGGCCG CGTACGTGGG GATCGAGACG CTGGGCCGTC CGCTGCTGGA CGGTTTGCGG GTGCTGGACT ACGGGCAGTT CGTCGGCGGC GCGGTGCTCA TCGCCCTGCT GGCGGTCGCG CTCGACCTGC TGCTGGCGGG GGTGGGAAGG CTCCTCGTGC CCAAGGGCCT CACCCTCGGC ACGCGGCGTC GCAAGGGGAA GCTGTCGGCG ACCGCCGCCG CGCAGCGCGA AGTGAGGGGA AGCAAGGCAT GA
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Protein sequence | MIFADALEWL LSPANWSGPT SIPTRVGVHL LYCLAAVLGA SAIAVPLGLW IGHTGRGGTV LVAGGNALRA LPTLGLVTLL YLLLGGGQAG VVIALIVLAI PPLLAGAYAG VQDVDRGVVD AARGMGMTGS QVLWRVELPN ALPLLLGGVR NATLQVVATA SVAAYVGIET LGRPLLDGLR VLDYGQFVGG AVLIALLAVA LDLLLAGVGR LLVPKGLTLG TRRRKGKLSA TAAAQREVRG SKA
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