| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6200 |
|---|
| Symbol | |
|---|
| ID | 8330411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 7265142 |
|---|
| End bp | 7266098 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 644946632 |
|---|
| Product | Alcohol dehydrogenase GroES domain protein |
|---|
| Protein accession | YP_003103851 |
|---|
| Protein GI | 256380191 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.230842 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGCGCCG CCAGGTACCA CCGCTTCGGT CCCCCCGACG TCCTGCGGGT CGAGGACGTC
CCCGACCCCG AGCCCGGCCC CGGCGAGGTC CTCGTCCGGG TCCGCGCCGC CAGCGTCGAG
GGCGGCGAGC AGTCCTTCCG CTCCGGCAAG CTGCGCCTGC TCTCCCGAGG CCCCTTCCCC
AAGGGCGTCG GCACCGGGTT CAGCGGCCAC GTCGCCGCGC TCGGCGCGGG CGTGCGCGGC
CGGCGCACCG GAGACCCGGT GTGGGGGCTC GTGCCGCACA TGACCATGGG CTCGGTCGCC
GAGCTGGTCG TCGTGCCGCA GGACCGGATC GCCCGCGCCC CCGGCGACCT CGACCTCCTC
GCCGCCGCCG CGCTCCCCGT CTCCGGCACC ACGGCCATCA CCGCCCTGCG GCACGAGGCC
CGCCTCGTCG CGGGCGAGCG GCTGCTCGTG CGCGGGGCCG CGGGCGGGGT CGGCAGCGCG
CTGGTGCGGT TCGGCAAGTC GCTCGGCGCC CACGTCACCG CGCTCGCCTC CGCCCGCGAC
CTCGACTGGG TCACCGGCGA GCTGGGCGCG GACGAGGCGC TGGACCACCG CGCCACCCGC
CCCGGCGACC TCGGCCGCTT CGACGTCGTG GTCGACGTCG TCGGCACCGA GCTGCCCGCC
TACCGCAGGC TCCTGACCAG GGGCGGGCGC ATCGTCCCGC TCTCCTTCGA CCACGACCGC
GCCGTCACCT CGCTGGCCAC CACCGCCCTG CACGCCGCGC TCGCCCCGCA CCGGGTGAAG
CTGTTCAGCA ACAACCCGTC CGGCGAGCGC CTCGCCGAGC TGACCGCCGC CGCCGAGTCC
GGGGCGCTGC GGCCGGACGT GGACACCGTG TTCGCCCTGG CGGACGTCGC CGACGCGCAC
CGCGCGCTCG AGGCGGGCGG CGTCCGGGGC AAGCACCTGG TGGAGGTCCA GACCTGA
|
|---|
| Protein sequence | MRAARYHRFG PPDVLRVEDV PDPEPGPGEV LVRVRAASVE GGEQSFRSGK LRLLSRGPFP
KGVGTGFSGH VAALGAGVRG RRTGDPVWGL VPHMTMGSVA ELVVVPQDRI ARAPGDLDLL
AAAALPVSGT TAITALRHEA RLVAGERLLV RGAAGGVGSA LVRFGKSLGA HVTALASARD
LDWVTGELGA DEALDHRATR PGDLGRFDVV VDVVGTELPA YRRLLTRGGR IVPLSFDHDR
AVTSLATTAL HAALAPHRVK LFSNNPSGER LAELTAAAES GALRPDVDTV FALADVADAH
RALEAGGVRG KHLVEVQT
|
|---|
| |