| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6195 |
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| Symbol | |
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| ID | 8330406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 7260387 |
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| End bp | 7261649 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644946627 |
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| Product | putative RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003103846 |
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| Protein GI | 256380186 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.694059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGATC CCGCCGCCCG CCGCGCCGTC GAGGCGGTCT GGCGGATCGA GGCGTCCCGG
CTCATCGCCG GGCTGGCCGC CTTCACCCGC GACCTCGGCC TCGCCGAGGA GCTCGCCCAG
GACGCCCTGG TCGCCGCGCT GGAGCGGTGG CCGTCCACCG GCATCCCGGA CAACCCCGGC
GCCTGGTTGA CCACCACCGC CCGCAACCGG GCCGTCGACC TGGCCCGCAG GCGCGGCAAC
CACGACCGCA AGCTCGCCGA GCTGGGCCGC GACCTCGACG AGCACGCCCC CGAGCACGAC
CCGGACGACG ACCTGCTCGG CCTGGTCTTC ACCGCCTGCC ACCCGGTGCT GTCCCCGGAC
GCCCGCGTCG CGCTGACCCT GCGCGTCGTG GGCGGCCTGA CCACCGAGGA GATCGCCAGC
GCGTTCCTGG TGCCCGAGCC GACCGTGGCG CAGCGGATCG TCCGGGCGAA GAAGGCGCTG
GCCAAGGCCG GGGCGCGGTT CGAGACCCCG CCGGACGAGC AGCGCGCCGA ACGCCTCGGC
TCGGTCCTCG GCGTCCTCTA CCTGATCTTC AACGAGGGCT ACTCGGCCAC CGGCGGCGAG
CACCTGGTGC GGCCCGACCT GTGCGTGACC GCCCTGCGCC TGGGCCGGGT GCTGGTCTCG
CTCGTGCCGC GCGAGCCGGA GGCGCACGGC CTGCTGGCGC TGATGGAGCT CCAGGCGTCC
CGCATCCGCG CCCGCACCAC CCCGGACGGC GCGCCGGTCC GGCTCCTGGA CCAGGACCGC
TCCCGCTGGG ACCGGCTGCT GATCACCAGG GGGCTGGCCG GGCTGGAGCG GGCGGAGCGG
CTGGGCGGCG GCCCGTACAC CGCGCAGGCC GCGATCGCCG CCTGCCACGC CCGCGCCGCC
ACCGCCGAGG ACACCGACTG GGTGCGCGTG GTCGGCCTGT ACGAGCTGCT CGCGCTGCGC
GTCCCGTCAC CGGTGATCGC GCTCAACCAC GCGGTGGCGT GCGGCATGGC GTTCGGGCCG
GAGGTCGGGC TGGAGCTGGT GGACGAGCTG CTGGGGGAGA AGGCGCTGGC CGACTACCAC
CTGCTGCCCA GCGCGCGCGG CGATCTGCTG GCGCGCCTCG GCCGGACCGG GGAGGCCCGC
GCCGAGTTCG AGCGCGCCGC CGCGCTGACC CGCAACGGGC GCGAGCGGGC CCAGCTCCTG
GCGCGGGCCC AGGAGTGCGG CTCAGGAGCG CGGCCGAGGA CTGCGGCCGA GGACCGCGGC
TGA
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| Protein sequence | MSDPAARRAV EAVWRIEASR LIAGLAAFTR DLGLAEELAQ DALVAALERW PSTGIPDNPG
AWLTTTARNR AVDLARRRGN HDRKLAELGR DLDEHAPEHD PDDDLLGLVF TACHPVLSPD
ARVALTLRVV GGLTTEEIAS AFLVPEPTVA QRIVRAKKAL AKAGARFETP PDEQRAERLG
SVLGVLYLIF NEGYSATGGE HLVRPDLCVT ALRLGRVLVS LVPREPEAHG LLALMELQAS
RIRARTTPDG APVRLLDQDR SRWDRLLITR GLAGLERAER LGGGPYTAQA AIAACHARAA
TAEDTDWVRV VGLYELLALR VPSPVIALNH AVACGMAFGP EVGLELVDEL LGEKALADYH
LLPSARGDLL ARLGRTGEAR AEFERAAALT RNGRERAQLL ARAQECGSGA RPRTAAEDRG
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