Gene Amir_6150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6150 
Symbol 
ID8330360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7203084 
End bp7204148 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content73% 
IMG OID644946583 
Productpeptide chain release factor 1 
Protein accessionYP_003103803 
Protein GI256380143 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.749977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGCCC CGCTGGACGC ACTGATCGCC GAGCACGGCG AGCTGGAGAC CAAGCTCGCC 
GACCCCTCGG TGCACGCCGA CCAGGCGGGA GCGCGCAAGC TCGGCAAGCG CTACGCCGAG
CTGACCCCGA TCGTGCGCGC CGCCCGCGAG CTGGAGCAGA CGCGCAACGA CCTGGGGGCG
GCGCGCGAGC TGGCCGGGGA GGACCCGGCG TTCGCCGAGG AGGCGGACGA GCTGTCCGCG
CGGATCCCGC AGCTGGAGGA GCGGCTCACC GAGCTGCTGC TGCCGCGCGA CCCGCACGAC
TCGTCCGACG TGGTGATGGA GATCAAGTCC GGGGAGGGCG GCGAGGAGTC GGCGCTGTTC
GCAGGCGACC TGCTGCGGAT GTACCTGAGG TACGCGGAGC GGCAGGGGTG GAAGGCCGAG
GTGCTCGACG GGACGGACTC GGACCTCGGC GGGTTCAAGG ACGTGACGGT CGCGATCAAG
TCGCGCGGGG ACGGGCCGGA CGGGGTGTGG TCGCGGCTCA AGTACGAGGG CGGCGTGCAC
CGGGTGCAGC GGGTGCCGGT GACCGAGTCG CAGGGGCGCA TCCACACGTC GGCGGCCGGG
GTGCTGGTGA TCCCGGAGAC CGAGGACGTG GCGTCGATCG AGATCGACGA CAAGGACCTG
CGGGTCGACG TGTTCCGGTC GTCCGGCAAG GGCGGGCAGA GCGTCAACAC GACGGACTCG
GCGGTGCGGA TCACGCACCT GCCGACGGGG ATCGTGGTGT CGTGCCAGAA CGAGCGGTCG
CAGCTGCAGA ACAAGGCACG GGCGATGCAG GTGCTCCAGG CGCGGTTGCA GGCGCTGGCG
GAGGAGAAGG CGCAGCAGGA GGCCTCGGAC GCCCGGCGGA CGCAGGTGCG GACGGTGGAC
CGGTCGGAGC GGGTGCGGAC GTACAACTTC CCCGAGTCGC GGATCTCGGA CCACCGGGTG
GGGTACAAGG CGCACAACCT GGACGCGGTG CTGGACGGGG AGCTGGACGC GGTGCTGGAC
GCCCTGTCGG CGGCGGACCG GGCGGAGCGG CTGGCCGGGG GCTGA
 
Protein sequence
MTAPLDALIA EHGELETKLA DPSVHADQAG ARKLGKRYAE LTPIVRAARE LEQTRNDLGA 
ARELAGEDPA FAEEADELSA RIPQLEERLT ELLLPRDPHD SSDVVMEIKS GEGGEESALF
AGDLLRMYLR YAERQGWKAE VLDGTDSDLG GFKDVTVAIK SRGDGPDGVW SRLKYEGGVH
RVQRVPVTES QGRIHTSAAG VLVIPETEDV ASIEIDDKDL RVDVFRSSGK GGQSVNTTDS
AVRITHLPTG IVVSCQNERS QLQNKARAMQ VLQARLQALA EEKAQQEASD ARRTQVRTVD
RSERVRTYNF PESRISDHRV GYKAHNLDAV LDGELDAVLD ALSAADRAER LAGG