Gene Amir_5987 details

Gene Information

• Locus tag: Amir_5987
• ID: 8330194
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 7031614
• End bp: 7032156
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 77%
• IMG OID: 644946417
• Product: hypothetical protein
• Protein accession: YP_003103640
• Protein GI: 256379980

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGTGGCCG TCGGGCTGCC CGCGCTGCTC GCCGCAGGCG TCGCGGCGGC GGGGCTGTTC 
TTCGGCGCGG GGGTGAAGGA CGACCCGGTG GCGGACACCA CCGCGCCGGA CCGGAGCGGG 
CCGCTGGCGC TCGTGCCGGT GCCCGCAGCG GCCGCCGGGT CCGACGAGTG CGCGGCGCTG 
CTGAGCGGGC TGCCGATGAA GCTGGTGTCC AACGGGGTCA CGCTGCCCCG GCGCGAGCTC 
GCCAACCCCG CGCCCGCCGG CGCGGTGGCG TGGGGCGACG CGGAGCACGA CCCGGTGGTG 
CTGCGGTGCG GGCTGGACCG GCCCGCCGAG CTGAAGCCGG ACTCGCAGCT GCGGTCGATC 
TCGGACGTGC AGTGGATCGA GGTGTCCGAG GGCGGGTCGA CGACGTGGTT CGTCGTGGAC 
CGGCCGGTGT ACGTGGCGCT GACCGTGCCG TCCGACTCGG GGACGGGGCC GCTGCAGGAC 
GTGTCGACGA CGGTGCGGGA CTCGTTGGCC GCGCGGCAGG TGGACGCGGT CGGGCCGAGC 
TGA 

 

Protein sequence

MVAVGLPALL AAGVAAAGLF FGAGVKDDPV ADTTAPDRSG PLALVPVPAA AAGSDECAAL 
LSGLPMKLVS NGVTLPRREL ANPAPAGAVA WGDAEHDPVV LRCGLDRPAE LKPDSQLRSI 
SDVQWIEVSE GGSTTWFVVD RPVYVALTVP SDSGTGPLQD VSTTVRDSLA ARQVDAVGPS