Gene Amir_5970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5970 
Symbol 
ID8330177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7013306 
End bp7014388 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content74% 
IMG OID644946401 
Producthypothetical protein 
Protein accessionYP_003103624 
Protein GI256379964 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAGG TGACCGGACT CCTGTTCGCG GCAGCCGCCG GGGCGCTGGC CTGGGCCGCG 
CGCGACGTTC CCGCCGCCAT GGGGGGCAGG CCGGACGAGC GCGTCCGCCG GTCTCCCCAG
TGGCGCGACG GCAAGTTCCA CAACCGCGCC ACCACCAGCA CCATGCCGCC CGACGGCGCC
ACCGAGACGC TCCGCGACTT CGCGTTCGGC GACAAGACCA AGCGCAAGCC CGCGGGCCCC
GTGCCGCTGG TGGCTCCGAG GCGCGACGCG CCCGCCGACG GCCTCCACAT CACCTGGTAC
GGCCACGCGT CCTCGCTCGT CGAGATCGAC GGCGCGCGCG TCCTGATCGA CCCGATCTGG
AGCGATCGCT GCTCCCCGTC CCAGGTCGTC GGCCCGCGCC GCCTCCACGC CGTCCCGCAC
GAGCTGGACG AGCTCGGCCG CGTCGACGCC GTCGTCATCT CCCACGACCA CTACGACCAC
CTCGACCTCC CCACGGTCCG CGCGCTCACC CGCGACCACG CCGCCGTGTT CGTCGTCCCG
CTCGGCATCG GCGCGCACCT GCGCAGCTGG GACGTCCCCG AGCACCGCAT CGTGGAGCTC
GACTGGAACG AGTCGCACCG CGTGGCGGGC ATCACCCTCA CCGCCACGCC CGCGCAGCAC
TTCTCCGGCC GCGGCCTCGC CCGCGACACC ACGCTCTGGG CGTCCTGGGT CATCGCGGGT
CCCGAGCACC GCGTCTACTA CACCGGCGAC ACCGGCTACT TCGACGGCTA CGCCGAGATC
GGCGAGGAGC ACGGCCCGTT CGACGCCGCG CTCGTCCAGA TCGGCGCCTA CGGCTCCGGC
TGGCCCGACA TCCACATGAC CCCCGAGGAG GGCGTCGCCG CGCACCGCGA CGTCCGGGGC
GGCCTGCTGA TCCCGGTGCA CTGGGCCACC TTCAACCTCG CCCTGCACGA CTGGTCCGAG
CCGGTGGACC GGGTGTGGCG GGAGGCCAAG GCGCACGACG TGCGGATGGC CGTCCCGAAG
CCGGGCGAGC GGATCGACGT CGCCAACCCG CCCGCCGTCG ACGGCTGGTG GCAGGCGCTC
TGA
 
Protein sequence
MKKVTGLLFA AAAGALAWAA RDVPAAMGGR PDERVRRSPQ WRDGKFHNRA TTSTMPPDGA 
TETLRDFAFG DKTKRKPAGP VPLVAPRRDA PADGLHITWY GHASSLVEID GARVLIDPIW
SDRCSPSQVV GPRRLHAVPH ELDELGRVDA VVISHDHYDH LDLPTVRALT RDHAAVFVVP
LGIGAHLRSW DVPEHRIVEL DWNESHRVAG ITLTATPAQH FSGRGLARDT TLWASWVIAG
PEHRVYYTGD TGYFDGYAEI GEEHGPFDAA LVQIGAYGSG WPDIHMTPEE GVAAHRDVRG
GLLIPVHWAT FNLALHDWSE PVDRVWREAK AHDVRMAVPK PGERIDVANP PAVDGWWQAL