Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5942 |
Symbol | |
ID | 8330149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 6987347 |
End bp | 6988888 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644946373 |
Product | malate synthase A |
Protein accession | YP_003103596 |
Protein GI | 256379936 |
COG category | [C] Energy production and conversion |
COG ID | [COG2225] Malate synthase |
TIGRFAM ID | [TIGR01344] malate synthase A |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGGAA TCCGAGTTCT CGGTGGCGCG GTCGAGCGCG GCGAGCAGGT CCTGACCCCG GACGCGCTGG AGTTCGTGGC CAAGCTGCAC CGCTCCTTCG CCGCCACCCG CGACGAGCTG ATCGCCCGCC GCGCCGACCG GGGACCGCTC GGGTTCCTCG CCGAGACCGC CGACGTGCGC GAGGGCGAGT GGCAGGTCGC CCCCGCCCCC GAACCGCTGC GCGACCGCCG GGTCGAGATC ACCGGGCCCA CCGAGCGCAA GATGGCGATC AACGCCCTCA ACTCCGGCGC GAAGGTGTGG CTCGCCGACC TGGAGGACGC CAACACGCCG CACTGGCGCA ACGTGGTGTC CGGGCAGGTC AACCTGTACG ACGCGGCGCG CGGGGACATC TCGCACACCT CGCCCGAGGG CAAGCGGTAC GAGCTGGCCG AGGGCCCGCG CCCGGCGATC GTGGTGCGCC CGCGCGGCTG GCACCTGCCC GAGCGCGGCA TCGAGGTCGA GGGCAGGCCC GCCATCGGCG CGCTGGTCGA CTTCGGGCTG CACTTCTTCC ACAACGGCGC CCTCGGCAGG CCGTACTACT ACCTGCCGAA GCTGGAGAGC TACCTGGAAG CCCGGCTGTG GAACGACGTC TTCACGTTCG CCCAGGCCGA GCTGGGCATC GCGCAGGGCA CGATCCGGGC GACCGTCCTC ATCGAGACGA TCCCGGCCGC GTTCCAGATG GAGGAGATCC TGCACGAGCT GCGCGAGCAC GCCTCCGGGC TCAACGCGGG CCGGTGGGAC TACCTGTTCA GCGTCATCAA GTACTTCCGC GACGCCGGGC GCGAGGCCGT GCTGCCCGAC CGCAACGCCA TCACCATGAC CGCGCCGTTC ATGCGCGCCT ACACCGAGCT GCTGGTGCGG ACCTGCCACA AGCGCGGGGC GTTCGCGATC GGCGGCATGG CGGCGTTCAT CCCGAACCGG CGCGACCCCG AGGTGACCGG GCGGGCGCTG GCGAAGGTGC GCGAGGACAA GACCCGCGAG GCCGGTGACG GGTTCGACGG GTCGTGGGTG GCGCACCCGG ACCTGGTGCC GGTGTGCCGC GAGGTGTTCG ACGCGCGGCT CGGGACGAGG CCGAACCAGC TGGACGTGAC GCGGAACGAG GTGTCGGTGA CCGCCTCGCA GCTGCTGGAC TTCGCGTCCG CGGGCGGGTC GGCGACCGCC GCCGGGCTGC GGTCCGCCGT GGACGTCGGG GTGCGGTACC TGCTGTCGTG GCTCGGCGGC AACGGGGCGG CGGCGATCCA CGACCTGATG GAGGACGCGG CCACGGCCGA GATCTCGCGG TCGCAGCTGT GGCAGTGGGT GCACAACGGG GTGGTGCTGG AGGACGGGAC GCCGGTGACG GCCGAGCTGG TGCGCGGGGT GCTGGCCGAG GTGCGCGCGG AGCTGGCCGG GGCCGGGGCG TCCGAGCACC TGGACGTGGC GGTGGAGCTG TTCGACCGGG TCGCGCTCGC CGACGACTTC GTCGACTTCC TGACCCTGCC CGCCTACCGG CACATCGCCT GA
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Protein sequence | MTGIRVLGGA VERGEQVLTP DALEFVAKLH RSFAATRDEL IARRADRGPL GFLAETADVR EGEWQVAPAP EPLRDRRVEI TGPTERKMAI NALNSGAKVW LADLEDANTP HWRNVVSGQV NLYDAARGDI SHTSPEGKRY ELAEGPRPAI VVRPRGWHLP ERGIEVEGRP AIGALVDFGL HFFHNGALGR PYYYLPKLES YLEARLWNDV FTFAQAELGI AQGTIRATVL IETIPAAFQM EEILHELREH ASGLNAGRWD YLFSVIKYFR DAGREAVLPD RNAITMTAPF MRAYTELLVR TCHKRGAFAI GGMAAFIPNR RDPEVTGRAL AKVREDKTRE AGDGFDGSWV AHPDLVPVCR EVFDARLGTR PNQLDVTRNE VSVTASQLLD FASAGGSATA AGLRSAVDVG VRYLLSWLGG NGAAAIHDLM EDAATAEISR SQLWQWVHNG VVLEDGTPVT AELVRGVLAE VRAELAGAGA SEHLDVAVEL FDRVALADDF VDFLTLPAYR HIA
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