Gene Amir_5867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5867 
Symbol 
ID8330074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp6907613 
End bp6908227 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content72% 
IMG OID644946299 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_003103522 
Protein GI256379862 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAGTTCG ACCTGACCAC GCTGCCCGCG TTCCTGATCG CCTGCGCGGT CGTGGTGCTC 
ACCCCCGGCG TGGACTCCTT CCTCCTGCTG CGCACCTCGA TGCGCTCGGG CACCCGCGCC 
GGCCTGCTGG CGCTGGCGGG CATCCACACC GCCGCCGCCA TCCAGGTCGC GGTCGTGATC 
TCGGGCCTGG GCGTGGTGAT CGCGGGCTTC CCGCCCGCCC TGACCGCGCT GCGCTGGATC 
GGCGCGGCCT ACCTGCTGTA CCTGGCGCTG TCGATCACCC GCGACCTGGT GCGCAACCGG 
GGTCGGGCGT CCGAGGAGGG CGAGGTCGTC GCGGACCGGC CGTTCCGGCG CGGCTTCCTG 
ACCAACATCA CCAACCCGAA GATGCTGCTG TTCTCCCTGG CGTTCCTGCC GCAGTTCATC 
GGCTCCGGCG ACCCCACCCC GCAGCTCGCG ATGCTCGCGG TGGTGTTCCT GGCGCTGGCC 
GCCGTGTGGG AGGGCACGAT CGTGCTGGCC GCGTCGGCGG TCGGCGGGCG ACTGCGCAAG 
CCGGGCGTGA CCACCGCGCT GGACGTGGTG TGCGCGGCGG TCTTCGCCAC CATGTCGGTC 
GGCCTGGTCA TCTGA
 
Protein sequence
MQFDLTTLPA FLIACAVVVL TPGVDSFLLL RTSMRSGTRA GLLALAGIHT AAAIQVAVVI 
SGLGVVIAGF PPALTALRWI GAAYLLYLAL SITRDLVRNR GRASEEGEVV ADRPFRRGFL 
TNITNPKMLL FSLAFLPQFI GSGDPTPQLA MLAVVFLALA AVWEGTIVLA ASAVGGRLRK 
PGVTTALDVV CAAVFATMSV GLVI