| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5767 |
|---|
| Symbol | |
|---|
| ID | 8329974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 6798490 |
|---|
| End bp | 6799767 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644946203 |
|---|
| Product | Putative FAD-dependent dehydrogenase-like protein |
|---|
| Protein accession | YP_003103426 |
|---|
| Protein GI | 256379766 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2509] Uncharacterized FAD-dependent dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTCGGGG ACCGCCGGGT GGACGTCCTG GTCATCGGCG CGGGGCCTGC CGGGCTGGCC
GCCTCGGCGG CGCTGGCCCC GTGGTCGGGG GAGGTGCTGC TGCTCGACCG CGGCGGACCG
CTCGCCCTGC GGTCGGAGGA CGACCCCGGC GACCTGGTCT CCGGGCAGGG CGGGGCCGGG
CTGTACTCGG ACGGGAAGTT CTCCTTCCAC CCGTCCGCCT CCCGGTTGTG GGAGGTCGAG
CCCCAGAGGG CGCTGGCCGA GTCCTACCGG TGGTTCGCCG ACCTGCTGGC GGACGTGCTC
CCGGTGCCCG GATACCCGGA GGGGCGGGTG AGCGGACCAG CGGCGCCACC GCCGGCCGGG
GCGCGCCGCA AGTCCTACCG GTCCCGCTAC GTGCCGTTGG AGCAGCGCTT CGAGCTGGTC
GGTGAGTTGT CGCGGGCAGG CGGGCGGGAG ATCCTGTTCG ACACCGAGGT CGTCGAGGTC
CACCCGAGGC GCGGCGGTCC CGTCGACGTG GTCGTCCGGC GACGGGGGAG CACCGCTGTG
ATCACCGCGA GGGCCGTCGT GCTGGCGGGG GGCCGGTTCG GCCCGCTCTC CGCCCGGCTG
GACCGGCGGC ACCTGCGGTT CGAGCGCGTC GAACTGGGCC TGCGGATCGA GCAGCCCGCG
TCGGTGTTCT TCCTGCGGGA CGAGCCCGAC CTGGACCCGA AGTACCTGAT CCCGGACCCG
GTCACCGGGG CGCAGTGGCG CACCTTCTGC TGCTGCCGGG ACGGCCGGGT CGTGCCGACC
GCCTTCGGGG AGTGGCGCTC GCTGTCCGGG CGCGCGGACT GCCCGCCCAC CGGGCTGTCC
AACGTCGGGT TCACCATGCG GGTCACCGAC GAGGCGCGGG GGCGCGCGCT GCTCGGGCTG
CTGGCCGCCG CGGCGCCCGG CAGGAGCGTT CCCGAAGGTC TTCCCTGGGA GCGCTTCATG
GCGGATGACG ACGGGGGCGC GGATCTGCTG GGTGGCGGCG AGGGCACTTC GCGGCTGCTG
AGCGCCGTGC GGCGCGGGCT CATCACACTA TCGGGGCTAT TCGGCGACAC GCCCTTGTCC
GGTTCGGTGC TGCACTGGCC CGCCGTCGAA GGGGTTGGAT ACTATCCGCG AACCGATTCC
GGTTTGCGAT TGCCGGGATT CCCCCTGTGG GTCGCGGGGG ACGCGTCCGG GAAATTCCGC
GGAATCACGG CAGCGCTGGT GAGCGGTCAC TTCTCCGGAC AGCAGGCGCT GCTGCGCCTG
CGCGAGGGAT CGGTGTGA
|
|---|
| Protein sequence | MVGDRRVDVL VIGAGPAGLA ASAALAPWSG EVLLLDRGGP LALRSEDDPG DLVSGQGGAG
LYSDGKFSFH PSASRLWEVE PQRALAESYR WFADLLADVL PVPGYPEGRV SGPAAPPPAG
ARRKSYRSRY VPLEQRFELV GELSRAGGRE ILFDTEVVEV HPRRGGPVDV VVRRRGSTAV
ITARAVVLAG GRFGPLSARL DRRHLRFERV ELGLRIEQPA SVFFLRDEPD LDPKYLIPDP
VTGAQWRTFC CCRDGRVVPT AFGEWRSLSG RADCPPTGLS NVGFTMRVTD EARGRALLGL
LAAAAPGRSV PEGLPWERFM ADDDGGADLL GGGEGTSRLL SAVRRGLITL SGLFGDTPLS
GSVLHWPAVE GVGYYPRTDS GLRLPGFPLW VAGDASGKFR GITAALVSGH FSGQQALLRL
REGSV
|
|---|
| |