| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5695 |
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| Symbol | |
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| ID | 8329902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 6724957 |
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| End bp | 6725883 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644946133 |
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| Product | TRAP transporter solute receptor, TAXI family |
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| Protein accession | YP_003103356 |
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| Protein GI | 256379696 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGCGTC GGGCGCTGCT GCTGTCCGCG CTGCCCGCGC TGACCTCGGT GGCCTGCGGT
CCGGCCGATC CGGTGGGTCC CGAGTCGCTG GTGCTGGCGA CCGGGCCGGA CGGTGCGGTG
TTCCGGGAGA TCGGGGCGGC GCTGGCGTCC GCGCTCGCCG AGAACCTCCC CGGCACCAGG
GTGACCGCGC GCCAGACCGG GGCGTCGGTG GAGAACGTCC GGCTGCTCAA GGAGGGCGCG
GTCCACCTCG GACTGTCCTC GCTGGACGCG ATCGTGGACA CGCCGCTCAG CGACTCCGAC
CCGGCGGGCG TCAGCGCGGT GGGCCGGTTG TACGACAGCT TCCTGCAGGT CGTGGTGCCG
GGCGACTCGC CGGTGCGCAG GCTCGCCGAC CTGGCGGGCC TGCGCGTGTC GCTGGGCCCG
GTCGAGTCGG GCAGCGAGTT CACCGGGACC AGGCTGCTCG ACCTGCTGGG CATCCGCGCG
CAGGGCCTGC GGATGGCGCA CGACGAGGCG TCCCGGCGCC TGGCTGCGGG CGCGATCGAC
GCGGCGGTGC TGCTCACCGG CATCCCGACC CCGGCGGTCA GCACCCTGCT GGGCGGTCGC
CCGCCCCGCC TGCTGGACCT GCCCGACGAG GCCGAGGCCC TGGCCCGCGC CTACCCCGGC
CCGTACGTCC CCGCGACCAT CCCGGCCACC ACCTACGGCC CGCTGGGCCC GTGCCGCACC
CTGGCCGTGC CGAACCTCCT GCTGGCCCGC ACCGCGCTGG CCGAGGACGC CGTCGAGGTC
GTCACCAGGA CGGTGTTCAC CGAGTCCGAG CGCATCGTCG CGGGCCACCC GGAGGCCAGC
AGGATCAACG TGCGAACGGG CATCGCGACG GGCCAGGTCC CGCTGCACCG GGGCGCGGCG
CGCTGGTTCC GCGAGGTGAA GCGCTGA
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| Protein sequence | MSRRALLLSA LPALTSVACG PADPVGPESL VLATGPDGAV FREIGAALAS ALAENLPGTR
VTARQTGASV ENVRLLKEGA VHLGLSSLDA IVDTPLSDSD PAGVSAVGRL YDSFLQVVVP
GDSPVRRLAD LAGLRVSLGP VESGSEFTGT RLLDLLGIRA QGLRMAHDEA SRRLAAGAID
AAVLLTGIPT PAVSTLLGGR PPRLLDLPDE AEALARAYPG PYVPATIPAT TYGPLGPCRT
LAVPNLLLAR TALAEDAVEV VTRTVFTESE RIVAGHPEAS RINVRTGIAT GQVPLHRGAA
RWFREVKR
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