Gene Amir_5689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5689 
Symbol 
ID8329896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp6712420 
End bp6713076 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content72% 
IMG OID644946127 
Producthypothetical protein 
Protein accessionYP_003103350 
Protein GI256379690 
COG category[S] Function unknown 
COG ID[COG5587] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02453] conserved hypothetical protein TIGR02453 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.971494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTCC GCGGGTTCGG TGAGTACGCG ATCGACTTCT TCGACGGGCT CGTGGCCGAC 
AACTCCAAGG CCTACTGGGA GGCCAACAAG CACACCTACC ACTCCGACGT CCGCGACCCC 
ATGCGCGCCC TGCTGGCCGA CCTGGAGGCG GAGTTCGGGG CCGGGAAGGT GTTCCGGCCG 
CACCGGGACG TCCGGTTCAG CAAGGACAAG ACGCCGTACA AGACGCACTG CGGCGGCGTG 
GTCGAGTCCG GGCGGGGCGG CGGGGCCTAC TACGTGCAGA TCAGCCCCGA GGGGCTGATG 
GTCGGCGGCG GGTCGTTCGC CATGGCGTCC GACCAGCTCG CGCGCTACCG CGAGTCCGCC 
GCCGACGAGC GCCGGGGCGA GGAGCTCCGG ACCGTCCTGG ACAAGCTCGT CGCGGGCGGC 
TGGGAGATCA GGGGCAACCG GCTCAAGCGC GCCCCGCGCG GCGCCGACCC CGAGCACCCC 
CGGCTGGAGC TGCTCAAGCA CCGGTCGATC TACGCCGGGA AGGTCTGGGG GCCGGACGAC 
GTGCTGCACG AGCCCGAGTG CTTCGACCGG GTCCTCGGGG CCTGGCGCGA GCTGGTGGCG 
TTCAACGAGT GGTGCGCCGA CCACGTCGGC GTCACCGAGG TCGGCTTCCG GCGCTGA
 
Protein sequence
MEFRGFGEYA IDFFDGLVAD NSKAYWEANK HTYHSDVRDP MRALLADLEA EFGAGKVFRP 
HRDVRFSKDK TPYKTHCGGV VESGRGGGAY YVQISPEGLM VGGGSFAMAS DQLARYRESA 
ADERRGEELR TVLDKLVAGG WEIRGNRLKR APRGADPEHP RLELLKHRSI YAGKVWGPDD 
VLHEPECFDR VLGAWRELVA FNEWCADHVG VTEVGFRR