Gene Amir_5518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5518 
Symbol 
ID8329724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6554188 
End bp6554733 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content71% 
IMG OID644945958 
Producthypothetical protein 
Protein accessionYP_003103182 
Protein GI256379522 
COG category[S] Function unknown 
COG ID[COG2306] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTCTGA GCGCGGCAGG CCAGACCACC GGAATCCACG TCCACCCGCC GAAGATCGAG 
TACTTCGACC TGGACGCGAA GTCCAACACC GACCCGAAGG GCTACCTGCG CGGGGTCGAG
GAGTACCGCC TGACGCCCGC GGGCCTGTAC ATGTCCCGCC CGGTGCCGGG CCACCCGGAG
CTCACGCACT TCGAGTCCTG GCTGCTGCCC CGGCACGGCC TGCGCGTCAC CCGCCAGTCC
TGGCACCCCG GCCGCGAGCG CGACTACGAC TTCTACGTCG ACGTCGTGGA GATCACCTCC
AGCGGCTCGG TGTGGAAGAC CGTCGACCTC TACCTCGACC TGCTGGTGCG CACCGGCCGC
GACGTCGTGG TGCTGGACAC CGACGAGCTG CTGGCCGCCG TCGCGAGCGG CAGGCTGGAG
GCCGAGCGGG CCCGGTGGGC GCTGGAGACG ACCTACACGG CGGTCGCGGG CGTGGCGGCG
CACGGCAACG ACCTGATCCG CTGGTTGGCC GAGCAGGGCA CCGTCACGAC CTGGCGACGC
CGCTAG
 
Protein sequence
MTLSAAGQTT GIHVHPPKIE YFDLDAKSNT DPKGYLRGVE EYRLTPAGLY MSRPVPGHPE 
LTHFESWLLP RHGLRVTRQS WHPGRERDYD FYVDVVEITS SGSVWKTVDL YLDLLVRTGR
DVVVLDTDEL LAAVASGRLE AERARWALET TYTAVAGVAA HGNDLIRWLA EQGTVTTWRR
R