Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5518 |
Symbol | |
ID | 8329724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 6554188 |
End bp | 6554733 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644945958 |
Product | hypothetical protein |
Protein accession | YP_003103182 |
Protein GI | 256379522 |
COG category | [S] Function unknown |
COG ID | [COG2306] Uncharacterized conserved protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACTCTGA GCGCGGCAGG CCAGACCACC GGAATCCACG TCCACCCGCC GAAGATCGAG TACTTCGACC TGGACGCGAA GTCCAACACC GACCCGAAGG GCTACCTGCG CGGGGTCGAG GAGTACCGCC TGACGCCCGC GGGCCTGTAC ATGTCCCGCC CGGTGCCGGG CCACCCGGAG CTCACGCACT TCGAGTCCTG GCTGCTGCCC CGGCACGGCC TGCGCGTCAC CCGCCAGTCC TGGCACCCCG GCCGCGAGCG CGACTACGAC TTCTACGTCG ACGTCGTGGA GATCACCTCC AGCGGCTCGG TGTGGAAGAC CGTCGACCTC TACCTCGACC TGCTGGTGCG CACCGGCCGC GACGTCGTGG TGCTGGACAC CGACGAGCTG CTGGCCGCCG TCGCGAGCGG CAGGCTGGAG GCCGAGCGGG CCCGGTGGGC GCTGGAGACG ACCTACACGG CGGTCGCGGG CGTGGCGGCG CACGGCAACG ACCTGATCCG CTGGTTGGCC GAGCAGGGCA CCGTCACGAC CTGGCGACGC CGCTAG
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Protein sequence | MTLSAAGQTT GIHVHPPKIE YFDLDAKSNT DPKGYLRGVE EYRLTPAGLY MSRPVPGHPE LTHFESWLLP RHGLRVTRQS WHPGRERDYD FYVDVVEITS SGSVWKTVDL YLDLLVRTGR DVVVLDTDEL LAAVASGRLE AERARWALET TYTAVAGVAA HGNDLIRWLA EQGTVTTWRR R
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