Gene Amir_5504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5504 
Symbol 
ID8329710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp6535463 
End bp6536029 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content72% 
IMG OID644945944 
Producthypothetical protein 
Protein accessionYP_003103168 
Protein GI256379508 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.00506408 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCGAAG ACATCGGCGG TTCCGAGCGC ATGGTGGCCG ACTGGGAGAC CGGTCTCAAG 
CAGAAGGCCC AGCGCTACGA GGCGATGGCC GAGCGGGTGC AGGGCATGTC CGTGACCGAG 
ACCTCCCGCG ACGGGCACGT GCGGCTCACC ATCGGGTCCA ACGGCATCCT CACCGCCCTG 
CAGATCGCCG AGCCCGCCCG CGAGCGGCGC ATGGCCGAGG TGTCGGCGGA GATCATGCGG 
ACGTTGCAGA AGGCCCAGTC GCGCATCCCG GAGCTGCTGC AGCAGGCCAT GGCGGAGACG 
ATCGGCACGC AGGACCAGAC GGCGAACACG CTGTTCGAGG AAGCCAGGAA GACCTTCCCC 
GCGCCGCCCG CCGAGGACCG CCCGCAACCG CAGCCGCACC GGGAGATGAG CTTCGGCATC 
GAGGACGAGC GGACCGCACC GCCCCCGCCG CCGCCGCCGC CGCGACACGC CCAGCAGCCG 
CCCGTTCCGC CGCAGCCGCC GCAGCGCAGG CCGAGGCGGG ACACCGAGGA GGACGACGAC 
TTCGGGGGTC AGAGCTTCCT CCGGTGA
 
Protein sequence
MPEDIGGSER MVADWETGLK QKAQRYEAMA ERVQGMSVTE TSRDGHVRLT IGSNGILTAL 
QIAEPARERR MAEVSAEIMR TLQKAQSRIP ELLQQAMAET IGTQDQTANT LFEEARKTFP 
APPAEDRPQP QPHREMSFGI EDERTAPPPP PPPPRHAQQP PVPPQPPQRR PRRDTEEDDD 
FGGQSFLR