Gene Amir_5455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5455 
SymbolargJ 
ID8329661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6481197 
End bp6482369 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content73% 
IMG OID644945896 
Productbifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 
Protein accessionYP_003103120 
Protein GI256379460 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1364] N-acetylglutamate synthase (N-acetylornithine aminotransferase) 
TIGRFAM ID[TIGR00120] glutamate N-acetyltransferase/amino-acid acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0425663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCGCA CCCAGGGCGT CACCGGCCCC CAGGGCTTCC GTGCCGCAGG TGTCGCCGCG 
GGCATCAAGG AGTCCGGCGC GCTCGACCTG GCGCTGGTCG TCAACGACGG CCCGAACGAC
GCCGCCGCCG CCGTGTTCAC CACCAACCAG GTCAAGGCCG CCCCGGTCCT GTGGTCCCAG
CAGGTGATCA AGGAGCGCAG GCTGACCGCC GTCGTCCTCA ACTCCGGCGG CGCCAACGCC
TGCACCGGCC CCGAGGGCTT CCAGGACACC CACGCCACCG CCGAGAAGGT CGGCGAGGCG
CTGGCCACCG GCGCGGGCGA GGTCGCGGTC TGCTCCACCG GCCTCATCGG CGAGCGGCTG
CCCATGGACA GGCTGCTGCC CGGCGTCGAC GCCGCCGTCG CCGAGCTGGC GGGCACCGAG
GCCGCCGGTC TCGCCGCCGC CACCGCCGTC ATGACCACCG ACAGCCACCC CAAGCAGTCC
TGGACGCGGC ACCCCGACGG CTGGTCCGTG GGCGGCTTCG TCAAGGGCGC GGGGATGCTC
GCCCCGAACA TGGCCACCAT GCTGTCGGTC ATCACCACCG ACGCCGTCAT CAGCGGCGAC
GCGCTCGACG CGGCCCTGCG GCACGCCGTG ACCAGGACGT TCGACCGGCT CGACGTCGAC
GGCGGCACCT CCACCAACGA CACGGTGATC GTGCTGTCCT CCGGCGCGTC CGGGATCGAG
CCCGAGGCGG ACGACTTCGC CGAGCTGCTC ACCGCCGTCG CCGGCGACCT GGTCAAGCAG
CTCCAGGGCG ACGCCGAGGG CGCCACCAAG GAGATCAGCG TGACCGTCAT GGGCGCGCGC
ACCGAGGCCG ACGCGGTCAC CGTGGGCAAG ACCGTCGCCG AGGACAACCT GGTCAAGACC
GCCCTGTTCG GCTCCGACCC CAACTGGGGC CGCGTCGCCA TGGCCGTCGG CCGCTCCGCC
GCCGAGGTCG ACCCCGACCG GCTGGGCATC ACCATCAACG GCGTCACCCT GTTCGCCGAC
GGGCACAAGG CCGCCGACCG CTCCGAGGCC GACCTGTCCG GCCGCGACAT CTCCATCGTG
GTCGAGCTGG GCCTCGGCGA GGGCTCGGCG ACCGTGCTCA CCACGGACCT GTCCCACGGC
TACGTCGAAG AGAACAGCGC GTACTCGTCA TGA
 
Protein sequence
MIRTQGVTGP QGFRAAGVAA GIKESGALDL ALVVNDGPND AAAAVFTTNQ VKAAPVLWSQ 
QVIKERRLTA VVLNSGGANA CTGPEGFQDT HATAEKVGEA LATGAGEVAV CSTGLIGERL
PMDRLLPGVD AAVAELAGTE AAGLAAATAV MTTDSHPKQS WTRHPDGWSV GGFVKGAGML
APNMATMLSV ITTDAVISGD ALDAALRHAV TRTFDRLDVD GGTSTNDTVI VLSSGASGIE
PEADDFAELL TAVAGDLVKQ LQGDAEGATK EISVTVMGAR TEADAVTVGK TVAEDNLVKT
ALFGSDPNWG RVAMAVGRSA AEVDPDRLGI TINGVTLFAD GHKAADRSEA DLSGRDISIV
VELGLGEGSA TVLTTDLSHG YVEENSAYSS