Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5353 |
Symbol | |
ID | 8329555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 6369652 |
End bp | 6370218 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644945790 |
Product | transcriptional regulator, MerR family |
Protein accession | YP_003103018 |
Protein GI | 256379358 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0102121 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTCGAGG AAGCGCCCAT CCGGGCCGGA TCCGGCGAAC AGGGTGAGCT GTTCCCGGAC TCCTCGCTGC CGGACGAGCT GGTCGGCTAC CGGGGGCCCG CCGCGTGCCA GATCGCCGGG ATCACCTACC GGCAGCTCGA CTACTGGGCG AGGACGGGCC TGGTGAACCC GACCATAAGG AGCGCCCACG GCTCCGGGAG CCAGCGGCTC TACTCGTTCA AGGACATCCT GGTCCTCAAG GTGGTCAAGC GGCTGCTGGA CACCGGCGTC TCGCTCCAGA ACATCCGGGT CGCGGTGGAC CACCTGCGCG AGCGCGGGGT GCAGGACCTC GCCCGGATAA CGCTGTTCAG CGACGGGACC ACGGTGTACG AGTGCACCTC GCCCGAGGAG GTCGTCGACC TGCTGCAGGG CGGGCAGGGC GTGTTCGGGA TCGCGGTCAG CGGGGCCATG CGGGAGATCA GCGGGACGAT CCACGAGTTC CCGGCCGAGC GCGCGGACGG CACCGAGATC GTGGTGGTGG CGGAGGACGA GCTGGCCAAG CGCAGGCGCA CGAGAGCCAC GGGCTGA
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Protein sequence | MVEEAPIRAG SGEQGELFPD SSLPDELVGY RGPAACQIAG ITYRQLDYWA RTGLVNPTIR SAHGSGSQRL YSFKDILVLK VVKRLLDTGV SLQNIRVAVD HLRERGVQDL ARITLFSDGT TVYECTSPEE VVDLLQGGQG VFGIAVSGAM REISGTIHEF PAERADGTEI VVVAEDELAK RRRTRATG
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