| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5332 |
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| Symbol | |
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| ID | 8329534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 6343268 |
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| End bp | 6344176 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644945770 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_003102998 |
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| Protein GI | 256379338 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.776192 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGGCGCA AGCAGAGACC GGCCGGGCTG TCCCAGCGGC ACGGGTTGGA CCCGGCCCGG
TTGCGGATGC CGGAGGACGG GCGGTGGGCG ACGCTGCGCG ACCACCTGGT CGACCGGCTC
CCCGTCCCGG CCGAGCGGGT CGACCTGATG CTCGCCGAGG GCCGGGTGCA CGACCTGACC
GGCCCGGTGG CCCCGAACGC GCCGTTCGTC CCCGGCGGCG CGGTGTGGTT CCACCGGGAC
CTGCCGGTGG AGGTCCCGGT CCCGTTCGAG ATCTCCGTGG TGCACCGCGA CGACGCGATC
CTGGTCGTGG ACAAGCCGCA CTTCCTGGCC ACGATCCCGC GCGGCAAGCA CGTCGTGGAG
ACCGCGCTGG TCCGCCTGCG CCGCGACCTC GACCTGCCCG CGCTCAGCCC GGCGCACCGG
CTGGACCGGG TCACGGCGGG GCTGGTGATG TTCGTGGTCG ACCCGGCGCT GCGCGGGCGG
TACCAGACGA TGTTCGCCGA TCGCCTGGTG CGCAAGGAGT ACGAGGCGAT CGCCCCGGTC
CGCGACGACC TGGAGCTGCC GCGCGTGGTG CGCAGCCGGA TCGTCAAGGA GAAGGGCGTG
ATCACCGCCC AGGAGGTGCC GGGGCCGGTG AACGCGGAGA CGCGCGTGGA GCTGGCGGAG
CGCAGGGGCG ACCTCGGCCG CTACCGGCTG CTGCCCACGA CCGGGCGCAC GCACCAGCTG
CGCGTGCACC TGAGCGGGCT CGGCGTGCCG ATCGTGGGCG ACGACTTCTA CCCGGTGCTG
CGGGAGAAGC CGCTCGACGA CTTCACCGAC CCGCTGCAGC TGCTGGCGAA GGTGCTGGAG
TTCACCGACC CGGTGACCGG CGAGCACCGC CGGTTCACCA GCTCGTTGGC GCTCGGGGCC
TGGAGCTGA
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| Protein sequence | MRRKQRPAGL SQRHGLDPAR LRMPEDGRWA TLRDHLVDRL PVPAERVDLM LAEGRVHDLT
GPVAPNAPFV PGGAVWFHRD LPVEVPVPFE ISVVHRDDAI LVVDKPHFLA TIPRGKHVVE
TALVRLRRDL DLPALSPAHR LDRVTAGLVM FVVDPALRGR YQTMFADRLV RKEYEAIAPV
RDDLELPRVV RSRIVKEKGV ITAQEVPGPV NAETRVELAE RRGDLGRYRL LPTTGRTHQL
RVHLSGLGVP IVGDDFYPVL REKPLDDFTD PLQLLAKVLE FTDPVTGEHR RFTSSLALGA
WS
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