| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5288 |
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| Symbol | |
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| ID | 8329490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 6287965 |
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| End bp | 6289797 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644945727 |
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| Product | SMC domain protein |
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| Protein accession | YP_003102955 |
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| Protein GI | 256379295 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.950541 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCACCTTG CAAACTTCTC GATTCGCGGT TTTCGCTCGC TGGCCGAGGT CGAGGACATC
CCCATCGGGA GTCCGACGAT CTTGGCCGGA CCCAATGACG GCGGCAAGTC ATCAGCGCTC
GACGCGGTGA AGTTCCTGCT GGGCCGCTAC TCCCCCATCG AGGACGACCG CACCTACCTG
GAGGGCGAGT CCGACGGTGG GCGCGCCGAC ATCGACGTCA GCGGCCGGTT CCTGCTCGAC
GAGTGGGAGC AGGAGAAGTT CTCGCTGCCC GCCGTGATCA AGCTGCGCCG GATCATGGAG
TACGACCAGG ACGCGCGCTA CGAGGTGTGG GGGCCGATCC CTGACGACGA GGACCTGCGC
GACCTCTCCC GGTCGAAGGT CTCGGACTTG AGGGAGCTGG TGCAGAAGTA CGGCCTTCGC
CCGCAGTCAC CCGGCAACAA GCCCGAACTG CTGGCGGCGG TACAGGAGTA CGCGCGGGGG
CACTCCAGCG GCGAGGGGTG GACGGGCGCA CCGCCGAACC TGACCAACCG CCTGCCGCAC
GTCGTGACGT TCACGGGCAA GACGCTGGAC CCGGAAGCCG CAGTCGCAGA GATCCTGGGG
CAGCAGCTGA AGGGGTACTT GCAGGAGGAG AGCACCCGCA AGCAGATCGA AGTGCTGGAG
GGCGACGCGC AGGACTGGCT CGTCGCTCAG GCGCAGCCGC TCGTCGACCA CATCACCCGA
CGCTGCAAGG ACATCACCGA GGTCGCGGTG AAGCCCGACA TCTCCATGAG CCCTCGCCTG
CGCTCGGCCT CGCTGCGGTT GAGGCGCTCG ACAGGAGAGC AGGTCCGGCT GGACCGATCC
GGTCAGGGCA GCGCGCGGCG GATCTCGCTG GCGGTCTGGG AGGCGTCCAC CGACATCCTG
GTCGAGGAGC AGCAGGACGA GGAGATGTTG GCGGAGAACG GCCCGCCGGT GCCGACGATC
GTGGTGTACG ACGAGCCCGA CACCCACCTC GACTACCACT ACCAGCGGGA AGTCATGGAG
CTGATCCGCG AGCAGTGCCG GGTGCCGAAT ACCAGCGTGG TGGTGGCCAC CCACTCCATG
AACCTGATCG ACGGCGTGGA CCTGCAGGAC GTCGTGCGGC TCGAACTGGA CGGGACGAGG
CGCACTCGCG TCGAGCGGCT GGGTGCGGCC ACCGGACACG ATGGGTTCGA CCTGCACCTG
CAGTCCATCG CCACTGCGGT CGGTCTGCGC AATTCGGTGC TGCTGCACGA GCGGTGCTTC
TTGGCCGTGG AAGGGGAAAC CGAGCAGAAG GCCATCCCGG TCCTGTTCAA GCTCTCCGAG
GGCCTGCAAC TCCAGTCGGC AGGCATCGCG CTGTGGGCTT GCGATGGGAA CTCCGGCGCG
CTGGATCTGG CGAGCTACCT GCACGAGCAC GGGCGAACCG TGGTGTTGCT GATCGACGCC
GACTGCGAGG TCAAGGACAG GATGTTCCGG GAAGCCGCTC TGCAGAGGGT TTTCGGCCGG
GAGGGCTACC ACAAGGTCGT CAAGTTCCTG GGCAAGCGCC AGGGCGTCAT GGAGCTTGAG
GAGTTGTTTG ACGACGCCAC CTGGGCGGAG ACCGCTAATG CGCAGTGGCC GCGCGTGGAC
GGAGCTCCCT GGAGTCCGGA TGACTTCGCC GCTCACCGAA CCGGCAGGAA GTTCAGCGAG
GGTGTTGTCA CCATGCTGAA GGAGGAGGGA GAGACCTCTC CTTCAGGCAA GCCCGCTCTG
GTGATGGCGG TCGTCAACCG CCTGAAGAGT CCGGAACAGG TACCAGAGGG GCTGCGGGAC
GCCTTCGCCG ATCTGAAGGA ACTGGCGAAC TGA
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| Protein sequence | MHLANFSIRG FRSLAEVEDI PIGSPTILAG PNDGGKSSAL DAVKFLLGRY SPIEDDRTYL
EGESDGGRAD IDVSGRFLLD EWEQEKFSLP AVIKLRRIME YDQDARYEVW GPIPDDEDLR
DLSRSKVSDL RELVQKYGLR PQSPGNKPEL LAAVQEYARG HSSGEGWTGA PPNLTNRLPH
VVTFTGKTLD PEAAVAEILG QQLKGYLQEE STRKQIEVLE GDAQDWLVAQ AQPLVDHITR
RCKDITEVAV KPDISMSPRL RSASLRLRRS TGEQVRLDRS GQGSARRISL AVWEASTDIL
VEEQQDEEML AENGPPVPTI VVYDEPDTHL DYHYQREVME LIREQCRVPN TSVVVATHSM
NLIDGVDLQD VVRLELDGTR RTRVERLGAA TGHDGFDLHL QSIATAVGLR NSVLLHERCF
LAVEGETEQK AIPVLFKLSE GLQLQSAGIA LWACDGNSGA LDLASYLHEH GRTVVLLIDA
DCEVKDRMFR EAALQRVFGR EGYHKVVKFL GKRQGVMELE ELFDDATWAE TANAQWPRVD
GAPWSPDDFA AHRTGRKFSE GVVTMLKEEG ETSPSGKPAL VMAVVNRLKS PEQVPEGLRD
AFADLKELAN
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