Gene Amir_5207 details

Gene Information

• Locus tag: Amir_5207
• ID: 8329409
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: -
• Start bp: 6203863
• End bp: 6204378
• Gene Length: 516 bp
• Protein Length: 171 aa
• Translation table: 11
• GC content: 78%
• IMG OID: 644945646
• Product: Rieske (2Fe-2S) domain protein
• Protein accession: YP_003102874
• Protein GI: 256379214
• COG category: [P] Inorganic ion transport and metabolism; [R] General function prediction only
• COG ID: [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.92121
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCACCA CCGACCCAGG CCCCCTCTCC CGCAGGCGCG TGCTCTGCGG AGTGCTCGTC 
GCGCTGGCCG TCCCCGGAGG CCTGGCGGCC TGCGGCGACG GCGGCTCGTC GAGCAGCGCC 
CCCACCACCG GCTCGACCGG GACCGGGGGC GGCGCCACCA CCGGCGGCGC GTCCACCCCG 
GCGACCTCGG CCACCGGCGG CTCCGCGACC TCGGGCGGCC AGTCCCTGGT GGCGCTGGCG 
GACGTCCCCG ACAACGGCGG CGTGGTCGTG GACGGCCCGA AGGGCAAGCC GCTCGTCCTG 
GTCCGCACCG GCGGCGAGGT CAAGGCCTAC GACGCGACCT GCCCGCACGT CGGCGAGACG 
GTGGGCGCCC CGAAGGACGG CACCATCACC TGCCCGGCGC ACGGCAGCCG GTTCGACGCG 
TCGACGGGCG AGGTCACCAA CCCGCCCGCG CAGCGCGGCC TGACCGCCGT GCAGGTCGCG 
GTCCAGGGCG ACCAGGTCGT GTACGTCGGC CCCTGA 

 

Protein sequence

MTTTDPGPLS RRRVLCGVLV ALAVPGGLAA CGDGGSSSSA PTTGSTGTGG GATTGGASTP 
ATSATGGSAT SGGQSLVALA DVPDNGGVVV DGPKGKPLVL VRTGGEVKAY DATCPHVGET 
VGAPKDGTIT CPAHGSRFDA STGEVTNPPA QRGLTAVQVA VQGDQVVYVG P