| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5189 |
|---|
| Symbol | |
|---|
| ID | 8329391 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 6183955 |
|---|
| End bp | 6185496 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644945628 |
|---|
| Product | glucose-6-phosphate 1-dehydrogenase |
|---|
| Protein accession | YP_003102856 |
|---|
| Protein GI | 256379196 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0364] Glucose-6-phosphate 1-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00871] glucose-6-phosphate 1-dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.663685 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCACCG CCGAGCAGCG CAACCCGCTG CGCGACCCCA GGGACAAGCG GCTGCCCCGC
ATCGCGGGCC CCAGCGGCTT GGTGATCTTC GGCGTGACGG GCGACCTGTC GCGCAAGAAG
CTCATGCCCG CGATCTACGA CCTGGCCAAC CGCGGCCTGC TGCCGCCGGG CTTCGCGCTC
GTCGGGTTCG CCCGCCGCGA CTGGGAAGAC CAGGACTTCA TGCAGGTCGT CCACGACGCG
GTCAAGGAGC ACGCGCGCAC GCCGTTCCGG CAGGCCGTGT GGGACCAGCT CGCCGAGGGC
ATCCGCTTCG TGCAGGGCAG CTTCGACGAC GACGCCGCGT TCGACTCGCT CGCCGAGACG
ATCCGGCTGC TCGACGAGGA GCGCGGCACG GGCGGCAACC ACGCGTTCTA CCTGTCGGTG
CCGCCGAGCG CGTTCACCAC CGTGGTGAAC CAGCTCAAGC GCGCCGGTCT GGCCTCGCCC
CCCGGCGACA ACCCGACGCA GTGGCGCCGC GTGGTGATCG AGAAGCCGTT CGGGCACGAC
CTGGCCAGCG CGAAGCAGCT GAACGGGATC GTGAACGACG TCTTCCCCGA GGAGTCGGTG
TTCCGCATCG ACCACTACCT CGGCAAGGAG ACGGTCCAGA ACATCCTGGC GCTGCGCTTC
GCGAACCAGC TGTACGAACC CATCTGGAAC GCGAACTACG TCGACCACGT GCAGATCACC
ATGGCCGAGG ACATCGGCCT CGGCGGTCGC GCGGGGTACT ACGACGGGAT CGGCGCGGCG
CGCGACGTCA TCCAGAACCA CCTGCTCCAG CTGCTGGCGC TGACCGCGAT GGAGGAGCCC
GTCTCCTTCC GCCCCAGCGA CCTGCGCGCG GAGAAGGTGA AGGTCCTGTC GGCCACCCGG
CTGGTGGGCC CGTTCGACGA GACGACCTCG CGCGGCCAGT ACACCGGCGG CTGGCAGGGC
GGGCAGAAGG TGCCCGGCCT GATCGAGGAG GGCGGCTTCT CCAAGGACTC CACCACGGAG
ACCTACGCCG CCATCACCGC CGAGGTGAAC ACCCGCCGCT GGGCGGGCGT GCCGTTCTAC
CTGCGCACCG GCAAGCGGCT GGGCCGCAGG GTCACCGAGG TGGCCGTGGT GTTCAAGCGG
GCGCCGCACC TGCCGTTCGA CGACACCGCG ACCGAGGAGC TGGGGCAGAA CGCCCTGGTG
GTGCGGGTGC AGCCGGACGA GGGCGTGACC ATCCGGTTCG GCTCCAAGGT GCCGGGCAAC
ACGATGGAGG TCCGCGACGT CACGATGGAC TTCGGCTACG GGCACGCGTT CACCGAGTCC
TCGCCGGAGG CCTACGAGCG GCTGCTGCTG GACGTGCTGC TCGGCGAGCC GTCGCTGTTC
CCGAAGAACG ACGAGGTCGA GCTCTCCTGG GAGATCCTCG ACCCGGTGAT CGAGCACTGG
GCGAGCACCG GCGAGCCGGA GAAGTACAAG GCAGGCACGT GGGGACCGCC GTCCGCTGAC
GAGATGCTGG CCCGCACCGG CAGGCACTGG AGGCGACCGT GA
|
|---|
| Protein sequence | MTTAEQRNPL RDPRDKRLPR IAGPSGLVIF GVTGDLSRKK LMPAIYDLAN RGLLPPGFAL
VGFARRDWED QDFMQVVHDA VKEHARTPFR QAVWDQLAEG IRFVQGSFDD DAAFDSLAET
IRLLDEERGT GGNHAFYLSV PPSAFTTVVN QLKRAGLASP PGDNPTQWRR VVIEKPFGHD
LASAKQLNGI VNDVFPEESV FRIDHYLGKE TVQNILALRF ANQLYEPIWN ANYVDHVQIT
MAEDIGLGGR AGYYDGIGAA RDVIQNHLLQ LLALTAMEEP VSFRPSDLRA EKVKVLSATR
LVGPFDETTS RGQYTGGWQG GQKVPGLIEE GGFSKDSTTE TYAAITAEVN TRRWAGVPFY
LRTGKRLGRR VTEVAVVFKR APHLPFDDTA TEELGQNALV VRVQPDEGVT IRFGSKVPGN
TMEVRDVTMD FGYGHAFTES SPEAYERLLL DVLLGEPSLF PKNDEVELSW EILDPVIEHW
ASTGEPEKYK AGTWGPPSAD EMLARTGRHW RRP
|
|---|
| |