Gene Amir_5135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5135 
SymbolfabG 
ID8329333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp6116622 
End bp6117377 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content73% 
IMG OID644945570 
Product3-ketoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_003102802 
Protein GI256379142 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.971494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGACT TCGCGGGCAA GACGGCGCTG GTGACCGGGG CCAGCAGGGG GATCGGCCTC 
GGGATCGCGC GCGAACTCGT GGCGCGCGGC GCGGCGGTCG CCATCACCGC GCGCAAGCCG
GAGCAGCTGG CCGCCGCCGC CGCCGAGCTG GGCGCGCCCG ACCACGTGCT CGCCATCCCC
GGCAACGCGG GCAGGGCCGA GGACCGGGAG GAGGCGGTGG CCAAGGTGAT CGAGCGGTTC
GGCAGCCTGG ACGTGCTGGT CAACAACACC GGCATCAACC CGTCGTTCGG GTCGCTGATG
GACGCCGACC TGGAGGCCGT CAAGAAGATC TTCGACGTGA ACGTGGTGTC CGCGCTGGGC
ATGGTGCAGC TGGCGTGGAA GGCGTGGATG TCCGAGCACG GCGGGTCGAT CGTGAACGTG
GCCTCGGTGG GCGGGCTGCG CTCGACCGGG GTGATCGCCG CCTACGGGGC GTCGAAGGCC
GCGCTGATCC GGTTGACGGC GGAGCTGGCC TGGCAGCTGG GGCCGAAGGT GCGGGTGAAC
GCGGTCGCGC CGGGCGTGGT GAAGACCAAG TTCGCCGAGG CGCTGTACAC CGGCCGGGAG
GAGGACGCGG CGGGCGCGTA CCCGCTGGGG CGGCTGGGCA CGCCGGAGGA CGTGGCGTCG
CTGGTGGCGT TCCTGGCGTC GGACTCGGCG TCGTGGGTGA CCGGCGAGAC GGTGGCGGTG
GATGGCGGGC TGCTGGCGAC CGGGACGCTC GGCTGA
 
Protein sequence
MTDFAGKTAL VTGASRGIGL GIARELVARG AAVAITARKP EQLAAAAAEL GAPDHVLAIP 
GNAGRAEDRE EAVAKVIERF GSLDVLVNNT GINPSFGSLM DADLEAVKKI FDVNVVSALG
MVQLAWKAWM SEHGGSIVNV ASVGGLRSTG VIAAYGASKA ALIRLTAELA WQLGPKVRVN
AVAPGVVKTK FAEALYTGRE EDAAGAYPLG RLGTPEDVAS LVAFLASDSA SWVTGETVAV
DGGLLATGTL G