| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_5112 |
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| Symbol | |
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| ID | 8329310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 6087647 |
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| End bp | 6089539 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644945548 |
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| Product | malto-oligosyltrehalose trehalohydrolase |
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| Protein accession | YP_003102780 |
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| Protein GI | 256379120 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR02402] malto-oligosyltrehalose trehalohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCTTCT CCGTGTGGGC CCCCGACCGG GACGGCGTCG TCGTCCGGGT CGACGGGCAG
GACCACGACA TGACCCCCGT CGGCGGCGGC TGGTGGCACA GCGACGCCAC CGGGACCGAC
TACGCGTTCG TGCTCGACGG CGACGCCCTC CCGGACCCGC GCTCGCTGCG CCAGCCGGAC
GGGGTGCACG GGCCGTCCCG CGCCTACGAC CACGGCGAGT TCGCCTGGAC GGACGACCGG
TGGACCGGGC GGGCGCTGCC CGGCGCGGTG GTCTACGAGC TGCACGTCGG CACGTTCACC
CCCGGCGGCA CCTTCGACTC CGCGGTCGAG CGGCTGGACC ACCTCGCCGA CCTGGGCGTC
ACCCACGTCG AGGTGCTGCC GGTCAACTCC TTCGACGGGC CGTCCGGCTG GGGCTACGAC
GGCGTGCTGT GGGGCGCGGT GCACGAGCCC TACGGCGGGC CGGACGGGTT CAAGCGGTTC
GTGGACGCCT GCCACGCGCG CGGCCTGGCC GTGCTGCTGG ACGTCGTCTA CAACCACCTC
GGGCCGTCCG GCGCGTACCT GGACCGGTTC GGGCCGTACT TCGCGGGCAG CAACGAGTGG
GGCCCCGGCC TCAACCTGGA CGGCCCCGGC TCCGACGAGG TGCGGCGGTA CGTCGTCGAC
AACGCCCTCG GCTGGCTGCG GGACTTCCAC GTCGACGGGC TGCGGCTCGA CGCCGTGCAC
GCCCTGCTCG ACCGGTCGGC CACGCACCTG CTGGAGCAGC TCGCCCGCGA GGTCGACGCG
CTCTCCACCG CGCTCGGCCG CCCGCTCACC CTCATCGCCG AGTCGGACCT CAACGACGCC
CGGCTGGTCA CCGCGCGCGA GGGCGGCGGC TACGGGCTGC ACGCCCAGTG GGCCGACGAC
CTGCACCACG CGCTGCACGT CGCCCTGTCC GGCGAGACGT TCGGCTACTA CCCGGACTTC
GAGGGCAAGC TGGCGACCAC GCTGGAGCGG GTGTTCCTGC ACGACGGCAC GTGGTCCTCG
TTCCGGGGGC GCGCGCACGG CAGGCCGGTG GACCGCGAGC GGCTGCCCGG CTACCGCTTC
CTCGCCTACC TGCAGAACCA CGACCAGATC GGCAACCGGG CCACCGGCGA CCGGCTGACC
GCGACCGTCT CCCCCGAGCG GCTGGCGATC GGGGCGGCGA TCGTCCTGTG CTCCCCGTAC
ACGCCGATGC TGTTCATGGG GGAGGAGTGG GGCGCGCGCA CGCCGTGGCG GTTCTTCGCC
TCGTTCCCGG ACCCCCAGCT CGCGGAGGCG GTCCGGACCG GGCGGCGGCG CGAGTTCGCC
CGGCACGGGT GGGGCGAGTC GGACGTGCCC GACCCGGTCG ACCCGGCCAC CGTCGAGGCG
TCCAAGCTGG ACTGGGCCGA GGTCTCGCGG CCCGAGCACG CGCGGGTGCT GGAGCTGCAC
CGGGCCCTGA TCCGGCTGCG GCGCGAGCAC CCGGAGCTGG CCGACCCGAG GTTGGACCGG
TTCCGCGTGG AGCAGCTCGG GTCGGTGCTG GTGCTCCACC GGGGCGATCT GCGGCTGCTG
TGCAACCTCG CGCCCGCCGG TGGCGTTCCC AGTGGTGAGG GCGCGGTCGG CGCCGCCGCT
GGTGCGGCTG TCGGGGCTGG TGCGGTGGGC GGCGCCGACG GCGCCCTCGC CCGGCCGGGC
CAGTCACGGC CGGGTTCCGC CGACGCGGGC ACCCCCGCTT CAGGGGCCCG CGACGCCGAG
GTCGACCTCG GCGTCGCGCC CGTCGCCGTC CTGCTCGCCT CCGGTGAGGC GGAGGTGGCG
GGACAGGTGC TCAGCCTGCC CGCGGAGACG TTCGCGGTCG TTCAGCTCCC AGGGAGCCAG
CCGACCTCGG TGAGCCGCTC GGCGAGGAGC TGA
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| Protein sequence | MTFSVWAPDR DGVVVRVDGQ DHDMTPVGGG WWHSDATGTD YAFVLDGDAL PDPRSLRQPD
GVHGPSRAYD HGEFAWTDDR WTGRALPGAV VYELHVGTFT PGGTFDSAVE RLDHLADLGV
THVEVLPVNS FDGPSGWGYD GVLWGAVHEP YGGPDGFKRF VDACHARGLA VLLDVVYNHL
GPSGAYLDRF GPYFAGSNEW GPGLNLDGPG SDEVRRYVVD NALGWLRDFH VDGLRLDAVH
ALLDRSATHL LEQLAREVDA LSTALGRPLT LIAESDLNDA RLVTAREGGG YGLHAQWADD
LHHALHVALS GETFGYYPDF EGKLATTLER VFLHDGTWSS FRGRAHGRPV DRERLPGYRF
LAYLQNHDQI GNRATGDRLT ATVSPERLAI GAAIVLCSPY TPMLFMGEEW GARTPWRFFA
SFPDPQLAEA VRTGRRREFA RHGWGESDVP DPVDPATVEA SKLDWAEVSR PEHARVLELH
RALIRLRREH PELADPRLDR FRVEQLGSVL VLHRGDLRLL CNLAPAGGVP SGEGAVGAAA
GAAVGAGAVG GADGALARPG QSRPGSADAG TPASGARDAE VDLGVAPVAV LLASGEAEVA
GQVLSLPAET FAVVQLPGSQ PTSVSRSARS
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