Gene Amir_5105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5105 
Symbol 
ID8329303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp6080997 
End bp6081590 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content76% 
IMG OID644945541 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003102773 
Protein GI256379113 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCACCC GAGCCGAGTC GGCGGCTGCG ACCCGACGCG CCCTGCTGGA CGCGGCGGCG 
GGACTGCTGG ACGAGGGCGG CCCGGACGCG GTCACCCTGC GCGAGGTGGG TGCCCGAGCG 
GGCGTCACCC GAGGGGCGCC CTACCGCCAC TTCCCGGACA AGGACAGCCT GCTGTCCACG 
ATCGCCGCCG AAGCCCTGGA CCGCTTGGCC GCCGAGGCGG GCGCGGTGCG CGCGGGCAGC 
GCGGGCTCCC CCGCGACCAG GCTGACCGGG GCGCTGGGCG TCCTGATGTC CGCAGGCCGT 
CACCACCCGC ACCTCTACCG GCTGATGTTC GCCCATCCGT CGGGTGACCG AGCCGCGATC 
GAGGCGGCCA CGGGCGCGGC GGCCCGCGCG GAGGCGGAGT TCCTGGCCGC CGTCGCCGAC 
CTGGTCGGCC CGGCCAAGGC CCCCCGCTTC GCGGGACTGC TGCTGACCAG CGCGCACGGC 
ATCACCACCA TGGAGGCCAA CGGCGACCCG TCCGAGGCCA AGTGGGGCGC GACGGCCGAG 
GAGCTGGTCG CGACCCTGGT GGCCATGATC GAGCGCCAGG CGCGGGAGGA GTGA
 
Protein sequence
MVTRAESAAA TRRALLDAAA GLLDEGGPDA VTLREVGARA GVTRGAPYRH FPDKDSLLST 
IAAEALDRLA AEAGAVRAGS AGSPATRLTG ALGVLMSAGR HHPHLYRLMF AHPSGDRAAI 
EAATGAAARA EAEFLAAVAD LVGPAKAPRF AGLLLTSAHG ITTMEANGDP SEAKWGATAE 
ELVATLVAMI ERQAREE