Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_5105 |
Symbol | |
ID | 8329303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 6080997 |
End bp | 6081590 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644945541 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003102773 |
Protein GI | 256379113 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCACCC GAGCCGAGTC GGCGGCTGCG ACCCGACGCG CCCTGCTGGA CGCGGCGGCG GGACTGCTGG ACGAGGGCGG CCCGGACGCG GTCACCCTGC GCGAGGTGGG TGCCCGAGCG GGCGTCACCC GAGGGGCGCC CTACCGCCAC TTCCCGGACA AGGACAGCCT GCTGTCCACG ATCGCCGCCG AAGCCCTGGA CCGCTTGGCC GCCGAGGCGG GCGCGGTGCG CGCGGGCAGC GCGGGCTCCC CCGCGACCAG GCTGACCGGG GCGCTGGGCG TCCTGATGTC CGCAGGCCGT CACCACCCGC ACCTCTACCG GCTGATGTTC GCCCATCCGT CGGGTGACCG AGCCGCGATC GAGGCGGCCA CGGGCGCGGC GGCCCGCGCG GAGGCGGAGT TCCTGGCCGC CGTCGCCGAC CTGGTCGGCC CGGCCAAGGC CCCCCGCTTC GCGGGACTGC TGCTGACCAG CGCGCACGGC ATCACCACCA TGGAGGCCAA CGGCGACCCG TCCGAGGCCA AGTGGGGCGC GACGGCCGAG GAGCTGGTCG CGACCCTGGT GGCCATGATC GAGCGCCAGG CGCGGGAGGA GTGA
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Protein sequence | MVTRAESAAA TRRALLDAAA GLLDEGGPDA VTLREVGARA GVTRGAPYRH FPDKDSLLST IAAEALDRLA AEAGAVRAGS AGSPATRLTG ALGVLMSAGR HHPHLYRLMF AHPSGDRAAI EAATGAAARA EAEFLAAVAD LVGPAKAPRF AGLLLTSAHG ITTMEANGDP SEAKWGATAE ELVATLVAMI ERQAREE
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