Gene Amir_5028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_5028 
Symbol 
ID8329226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp5988557 
End bp5989141 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content73% 
IMG OID644945464 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003102696 
Protein GI256379036 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAGC AGGCGCTGAC CCCCAGGGGA GCCGCGACCA GGGCGCGGAT CATCGAGGCG 
GCCACCGCCG AGTTCACCGA GCACGGCATC GCGGGCGCGC GCGTCGAGCG GGTCGTGGCG 
GCGGCGCGCA CCAACAAGGC CCAGCTCTAC GCGTACTTCG GCAGCAAGGA CGGCCTGTTC 
GACGCGGTGC TGGGCAGCCT GATGGACCGG ATCGTGGACG TGGTCCCGAT CGACGCCACC 
GACCTCGCCG ACTGGGCGGT GCGGCTGTAC GACGACTACC TGGTCCGGCC CGAGGTGGTG 
CGGCTGGCCA CGTGGACGCG GCTGGAGCGC CGCCCGTCCG GCCACCTGGT GACCGACCAC 
GAGCAGCGCG AGGACGTGAA GCTGCGCGCG ATCGCCGAGG CGCAGGCCGC CGGTCTGGTC 
GTGCCGGGCG ACCCGTTCGA CGTGATGGTG CTGGTGATCT CGATGTCGCT GGCCTGGTCG 
CCGGTCAGCA CCTCCTACGC GGCGAGCGCC GACGAGCCCG CCGAGGCGCA CGAGCGCCGC 
AGGTCGCTGC TGCGCGAGAG CGTGCGGCGA GCGGTCATGC TCTGA
 
Protein sequence
MAEQALTPRG AATRARIIEA ATAEFTEHGI AGARVERVVA AARTNKAQLY AYFGSKDGLF 
DAVLGSLMDR IVDVVPIDAT DLADWAVRLY DDYLVRPEVV RLATWTRLER RPSGHLVTDH 
EQREDVKLRA IAEAQAAGLV VPGDPFDVMV LVISMSLAWS PVSTSYAASA DEPAEAHERR 
RSLLRESVRR AVML