| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4938 |
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| Symbol | |
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| ID | 8329136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 5890985 |
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| End bp | 5892421 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 644945378 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003102610 |
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| Protein GI | 256378950 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0173723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACCCGG AACGGCGGCG CCGGGCGCTG CTGCCGGTGG TGCTCTCGGC CACCTTCGCC
CAGCTGCTGA ACGTCACCCT CGTCCAGGTC GCCGCGCCCG TGCTGCGCGC CGACCTGGGC
GCGGGTCCGG GCGCCGCGCA CCTGGTGCTG GCAGCGTTCA CCCTCGGCCA CGCCTGCCCG
CTCATCGCCT CCGCCAGGCT CGGCGACAGC TTCGGCCACC GCGCGCTGTT CGCCCTCGGC
GCCGCCCTGT TCGCCCTGGC CACGGCGGCC TGCGCGGTCG CGCCGTCGAC CGGGGCGCTG
GTGGCGGCCC GGCTCCTGCA GGGCGCGGGC AGCGGGATCG TCGCGCCCCA GGTGTTCTCG
CTCATCCGGA CCGCGCTGCC CGCCCACCGG CACGGCCGCG CGCTGGCCGC GTTCGGCGCG
GTCATCGGCA CGGCCTCGGC GATCGGCCCG GTGCTGGGCG GCGCGCTGCT GGCCGCCGAC
CCGCTCGGCC TCGGCTGGCG CGCGCTGTTC CTGGCGCAGC TCCCGGTCGC GCTCGCCGCC
CTCGCCGGTT CCGCCCTGCT GCCCGCGGCG GAGAAGGCCC GGGACGGCAA GGCCCGGACC
GGCAAGGCCC GGACCGGCAA GGCCCGGACC GGCAAGGCCC AGACCGGCAG ACCCCAAGCG
CCGCAACGGG TCGACGCGCT CGGCGCCGCG CTGGTCGCCG CGTGCTGCGC CGCGCTCGTG
CTGCCGCTGG CCGTCGGCCC GGACGCCGGG TGGCCGCCCT GGGCGTTCGC CTCGCTCGGC
GCGGCCGTCG TCCTGGGCGC GGCTTTCCTG CTCTCCCAAC GCCTCCGAGC CGACCCGCTG
GTGCACCCGG AGGCACTGCG CCACCGCGCC ACCCGCACCG GCGTGCTGGT CGTGCTGGTG
TTCAACGCGG GCGTGCCCTC GCTGACCTAC CTGGTGCTGC TGCACCTGCA GGAGCAGGGC
CGGACCCCGC TGCAGGCCGC GCTGGTCAAC ACCCCGTACG CGCTCGCCGC CGTCCTCGGC
AGCGCGCTCG CCCCCGCACT GGCCGAGCAC CGCCGCACCA CACCCGCGGC AGCCGCCGCG
CTGGCCCTGG TCACCGCCGC CCTCACCGCG CTCCCGCTCG GCCCCGTGCC GCTCGCGCTG
GGCGGAGCCG CGTTCGGGCT GTTCACCTCG ACGGTGTTCG CGCTGGTGCT CTCCCGCGCC
CCGGAACCGG CGGCGGCCTC CGTCGCGGGC CTGCTGCCCA CCGCGCAGCA GCTCGGCGGC
ACGGTCGGCG TCGCGCTCGC CGGGACCGCC CACGCCGCAG GCGGTTTCCC GGCGGCCATG
GCCTACGAGG CCCTGGTGTT CGCGCTCGCG GCGGCGGGCG CGTCCCGGCT GGTCACCGGA
GGACCCGCCA CCACGAAACC CGCCACCGCG AAGCCATCCA CCGCCGACAG CAGCTGA
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| Protein sequence | MNPERRRRAL LPVVLSATFA QLLNVTLVQV AAPVLRADLG AGPGAAHLVL AAFTLGHACP
LIASARLGDS FGHRALFALG AALFALATAA CAVAPSTGAL VAARLLQGAG SGIVAPQVFS
LIRTALPAHR HGRALAAFGA VIGTASAIGP VLGGALLAAD PLGLGWRALF LAQLPVALAA
LAGSALLPAA EKARDGKART GKARTGKART GKAQTGRPQA PQRVDALGAA LVAACCAALV
LPLAVGPDAG WPPWAFASLG AAVVLGAAFL LSQRLRADPL VHPEALRHRA TRTGVLVVLV
FNAGVPSLTY LVLLHLQEQG RTPLQAALVN TPYALAAVLG SALAPALAEH RRTTPAAAAA
LALVTAALTA LPLGPVPLAL GGAAFGLFTS TVFALVLSRA PEPAAASVAG LLPTAQQLGG
TVGVALAGTA HAAGGFPAAM AYEALVFALA AAGASRLVTG GPATTKPATA KPSTADSS
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