| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4931 |
|---|
| Symbol | |
|---|
| ID | 8329129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 5882507 |
|---|
| End bp | 5883967 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 644945371 |
|---|
| Product | sodium/sulphate symporter |
|---|
| Protein accession | YP_003102603 |
|---|
| Protein GI | 256378943 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0471] Di- and tricarboxylate transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGACACCT TCACCTACAC GACCCGCCCG GAGCAGGCGA CCGTCCCACT CGCCCGCCCC
GAACCGCCGC GCAGGCGCCC GCGCGCCCAC CTCGCCCTCG CGCTCGCCGC CCTCGCGGTG
CTCGCCGCGG CCCTCCCGGC GGACGGGCTG CACTGGCGGG GCGCGGTCGT GCTCGCGGTG
TTCACGGGGG CGGTCGGGGC GTGGGTGTTC ACGAAGGTCG ACGACACCTG GATCGCGCTC
GTCGCCGTCT CGCTCCTCGC CGCCTCCGGC GTCGTCGAGG CCGACGAGGT GTTCGCCACG
CTCGGGGCCG ACCTGGTCTG GCTGCTCATC GCCGCGTTCG TGCTCGCCGC CGGGCTCACC
CGCTCGGGGC TGGTCGAGCG GTTCACGGCC GCGCTGCTCA ACCGGGCCCG CACCCCGCGC
CAGCTCGCGC ACCTGACCAC CCTGGCGCTG GTCGGCTCCT CCCTCGCCGT CCCCTCCACC
TCCGGGCGGG CCGCGCTCGC GCTGCCGGTG TTCACCTCGC TCGCGAAGGC CGTCCCCCCG
CGCCTGGCCC GCGCGCTCTC CCTGCTGTTC CCCACCGTCG TGCTGCTCTC CGCCGTCTCC
ACCCTGATCG GCGCGGGCGC GCACCTCATC GCCGACCAGC TCCTCGCCGA CGCCACCGGC
GACGGCATCG GGTTCCTGCA CTGGCTGCTG CTCGGCCTCC CCCTCGCCGT CCTCTCCTGC
CACCTGGCCG CCGAGCTGAC CCTGCTGCTG TTCACCCGCC GCCAGGACCG CAGGACCCGC
CTGAGCCTCG ACCTCCCCGC CCCGCCGAAG ACCTGGTCGA AGCCCGAGAA GCACGCCGCC
GCCACCACCG CCGCCGTCCT CGCCCTCTGG TGCGCCGAGC CCCTCCACGG CGCCCCTCCC
GCGCTCGTCG GCCTCCTCGG CGCCCTCGTC ATCACCGTCC CCCCGCACGG CGAGCACCGC
GTCACCCCCG GCGCCGCCCT CAAGACCGTC CCCTGGTCGC TCCTGCTGTT CACCGCCGCG
ACCGCCGCCC TCGGCGAAGC CCTGGTCACC ACCGGCGCCG CCCAGTGGCT CGCCGACCAC
GCCCTCGCCC CGCTCCGGCA CGCCACCCCC GAGCACTTCC TGGTCGCCGT CGTGCTGGTC
GGCACCGCCG CGCACCTGGC CGTCCAGTCC CGCTCGGCCC GCTCGTCCGT GCTGGTCCCG
GTGGTGATCC CGCTGGCCCT GGCCGCCGGG GTGAACCCCG CGCTGGCCGT GTTCGCCTCG
ACCGCCGCCG CCGGGTTCTG CCACACCCTC ACGTCCTCGG CGAAGCCGGT CGCGCTGTTC
GCCGACGTCG AGGGCGTCCC CACCTACTCG GCGCGCGACC TGCTGCGCCT GTCCGCCGCG
CTGGCCCCGC TGCACGTCGC CGTCGTCAGC GCGTTCGCCC TGCTCGTGTG GCCCGCCTCG
GGCCTCCCCA TCTCCCTCTA A
|
|---|
| Protein sequence | MDTFTYTTRP EQATVPLARP EPPRRRPRAH LALALAALAV LAAALPADGL HWRGAVVLAV
FTGAVGAWVF TKVDDTWIAL VAVSLLAASG VVEADEVFAT LGADLVWLLI AAFVLAAGLT
RSGLVERFTA ALLNRARTPR QLAHLTTLAL VGSSLAVPST SGRAALALPV FTSLAKAVPP
RLARALSLLF PTVVLLSAVS TLIGAGAHLI ADQLLADATG DGIGFLHWLL LGLPLAVLSC
HLAAELTLLL FTRRQDRRTR LSLDLPAPPK TWSKPEKHAA ATTAAVLALW CAEPLHGAPP
ALVGLLGALV ITVPPHGEHR VTPGAALKTV PWSLLLFTAA TAALGEALVT TGAAQWLADH
ALAPLRHATP EHFLVAVVLV GTAAHLAVQS RSARSSVLVP VVIPLALAAG VNPALAVFAS
TAAAGFCHTL TSSAKPVALF ADVEGVPTYS ARDLLRLSAA LAPLHVAVVS AFALLVWPAS
GLPISL
|
|---|
| |