| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4859 |
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| Symbol | |
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| ID | 8329057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 5785695 |
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| End bp | 5787365 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644945299 |
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| Product | thiamine pyrophosphate protein central region |
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| Protein accession | YP_003102531 |
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| Protein GI | 256378871 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGAGG ACGGCGTCGA CTGCTGGAGC GCGGTGGCCG ACGTGCTGGC CGCCACCGGG
TGCTCCTCGG TGTTCGGGCT GCCCTCCGAC GAGCCCGGTC TGCTGGACGC GGCCGACGCG
CACCCCGGTC TGCGGGCGTG GCGGATCGGC GACCAGCGCA CGGCGGCGTG CGCGGCGGCC
GGGCACGCCA TGGTGTCGGG GCGGCCGGTG GCGCTGGCGG TGAACTCGGG GCCCGGTTTC
GCCAACGCGC TGGCCGGTCT GCTGGAGGCG TCGTCGTTGG CGGTTCCGCT GGTCCTGATC
ACCACTTCGG TGCCGTCCGA GGGGGTGGGC CGGGGCGGGT TCCAGCACGT GGACCAGCAG
CGGATGCTGG CGCCGCTGAC CTCCTGGCAG TACGAGGCGC GCTCGGCGGA GGTCCTGACG
TGGGCGGTGG AGCGCGCGGT GCGGCTGGCC GTCGACGGTC GGGCGGGGAT CACCGCGGTG
GAGATCGCGG ACGAGGTGCT GCGGGCGCCG GTGCCTGCCC CGGTCGGGGT GCGCCCGGTG
CTGCCGCTGC GCTCGACGCC GTCGGAGGAC GCGCTGGAAC GGGCGACGGC CTTACTGGAC
GGGGCTCGGC GGCCGGTGGT GCTGGCTGGC GGGGGTTGTC GCTGGTCGGC GGGCTCGGGC
CCGGCGGTGG TGGGGCTCGC CGAGCGGTTG GGCGCCCCGG TGCTCACCAC GGCGGCGGGA
CGCGGGGTGG TGCCGGAGAC CCACCCCCTG GCGCTCGGGC TGGTCGGGCT CTACACCACG
CCGCCCGCCG GTGAGGTGCT GGCGGAGGCG GACGCGCTGC TGGTGCTCGG CTCCCGGTTG
GAGGAGACCG CGCGGATGGG GTGGGACGCC TGGCGGAGCA CGCCGACCGT GCAGGTGGAC
AAGTCGGCCG CCGCGTTCGG CGAGGGCTGC TCACCCGAGG TGGCGCTGCT CGGGGACGTC
GCGCTGACCG CGGGCGCGCT GACCGCGCGG GTGGCCGTCC GGGACCGGGC GCCGTGGTCG
GAACGGGTGC GCGGCGTGGC GCTGGCCCAG GAGGAGTGCG CTCGGGCGTC GTTCGCGCGC
TCGCCGGTGC GGGCGGCCGT GCGTCTGGCC CAGCGGGAGC TGGGGAGGCT GGCGGTGGTG
GTGCAGGACA ACGGGCTGCA CGACATGTGG AGCTACCACT ACCCGGTGTT GCGGGTCGAG
GAGGGCACGA CCGTGGTGTG CCCCGGCGAG CAGACCCTGA TGGGTTTCGG GTTGGCCGCG
TCGGTCGGCG CCTCGGCGGG CACGCCCGAG GGCTCGGTGT GCGCGGTGTT CACCGGCGAT
TCGGCGTTCC GGCTCAGCGC GGGCGCGCTG GAGTCCTTGC GGGAGCAGGG TTCCGGTGTC
GTGGTGGTGG TGTTCGACGA CGCGGGCTTC GGCTGGCCGA GGCGGTTGCG GCTGGCGGTG
GGCGCGGACA CCCGCGTCAC CGAGGTCTCG GGCGGGCCGA CCGCCGACGA GCTGGCCGCC
GTCCACGGCG GGTGGGGCGC GACCGCGCGC ACCGAGGCCG AACTGGTGGC GGCGCTGCGC
ACGGCGCGCG ACCGGGCGGT GCGGGGCGGG TTCAGCGTGG TGCGCGTGCC CGCCGCGGAC
GACGACGTGC CGGTCGGGGT GCTGGAGATG GAGCGGGAGG GGCACGCGTG A
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| Protein sequence | MSEDGVDCWS AVADVLAATG CSSVFGLPSD EPGLLDAADA HPGLRAWRIG DQRTAACAAA
GHAMVSGRPV ALAVNSGPGF ANALAGLLEA SSLAVPLVLI TTSVPSEGVG RGGFQHVDQQ
RMLAPLTSWQ YEARSAEVLT WAVERAVRLA VDGRAGITAV EIADEVLRAP VPAPVGVRPV
LPLRSTPSED ALERATALLD GARRPVVLAG GGCRWSAGSG PAVVGLAERL GAPVLTTAAG
RGVVPETHPL ALGLVGLYTT PPAGEVLAEA DALLVLGSRL EETARMGWDA WRSTPTVQVD
KSAAAFGEGC SPEVALLGDV ALTAGALTAR VAVRDRAPWS ERVRGVALAQ EECARASFAR
SPVRAAVRLA QRELGRLAVV VQDNGLHDMW SYHYPVLRVE EGTTVVCPGE QTLMGFGLAA
SVGASAGTPE GSVCAVFTGD SAFRLSAGAL ESLREQGSGV VVVVFDDAGF GWPRRLRLAV
GADTRVTEVS GGPTADELAA VHGGWGATAR TEAELVAALR TARDRAVRGG FSVVRVPAAD
DDVPVGVLEM EREGHA
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