| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_4857 |
|---|
| Symbol | |
|---|
| ID | 8329055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 5783098 |
|---|
| End bp | 5784357 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644945297 |
|---|
| Product | 3-oxoacyl-(acyl-carrier-protein) synthase 2 |
|---|
| Protein accession | YP_003102529 |
|---|
| Protein GI | 256378869 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
|---|
| TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCAT CGAGCAGGAC CGGCGGAGGG CGTCGGGTCG TCGTCACCGG CCGGGGAGCC
GTCACGCCCA TCGGCGCGGA CTGGCCGACC ACGTGGGCGA GCATGGTGAA GGGGTCGAGC
GGCATCCGCG TGCTGTCCAC GGTGGACACG ACAGGACTGC CGGTGCGGAT CGGCGGCGAG
GTGCTGGACC TGGACCTGTC CGGGCTGCCG CCGAAGGCGG TGCGCCGCAC CGACAGCTCG
GTGCACATCG CGCTGTCGGC CGCGCTGGAG GCGGTGGCCG ACGCGAACCT GGTGGTCGAC
GAGGCGCTGG CGCCGAGAGT GGCGGTGGTG CTGGGGTCGG CGGGTGGGCC GACGAAGCTG
TCCGCAGCCG CGACCCGCGC GCTGGACGAG CGGGGGGCGC GCGGGTTGAG CCCTTACTAC
TTCCCCGGCA GCGGCGTGGA CAGCGCGGCG GGCGAGGTCG CGCTGCACCT GGGCGCGCAG
GGCCCGTCGG TGTGCGTGGT GACCGCGTGC GCGACCGGGG CGACCTCGAT CGGCGAGGCG
GCGCGGTTGA TCCGGCACGG CGCGGCCGAC GTGGTGGTGG CGGGCGGCGT GGACGACACG
ATGACCAGGC TGGACATCAC CGGGGCCGCG ATCTCCCGCG CCCTGTCCAC CCGCAACGAC
GACCCGGAGG CCGCCTCCCG GCCGTTCGAC CGGGGCAGGG ACGGGTTCGT GATGAGCGCG
GGAGGCGGCG TCGTGGTGCT GGAGAGCGAG GAGCACGCCA GGGCGCGCGG CGCCAGGGTG
CTGGGCGAGC TGGCGGGCTA CGGGGCGACC ACCGACGCGT TCCACCCGAC CGCGCCGCAC
CCTGAGGCCG GTCCTGCGCG GCGGGCGATG CACGACGCGC TGGCGCAGGC GGGGCTGGCG
CCGCAGGACG TGGGCTACAT CAACGCGCAC GGCACGTCGA CGCCGCTCAA CGACACCACC
GAGCTGAGGG CGATCCGGGG CGTGTTCGGC TCGCACGCCA CGCGCATCCC GGTCAGCTCG
ACCAAGAGCA TGACCGGGCA CATGCTGGGC GGGGCGGGCG CGGTCGAGCT GATCGTGGCG
CTGGAGTCGG TGCTGACCGG CGTGACGCCG CCGACGATCA ACTGCGACGA CCCGGAGGAC
CCGGAGGTGA ACTTCGTGCC GCACACCGCG CAGGAGCACC GCGTCGAGGC CGCGATGAGC
AACTCGTTCG GCTTCGGGGG CCACAACGCC GTGCTGATCG CGCGCCGCTG GGCGGGTTGA
|
|---|
| Protein sequence | MTSSSRTGGG RRVVVTGRGA VTPIGADWPT TWASMVKGSS GIRVLSTVDT TGLPVRIGGE
VLDLDLSGLP PKAVRRTDSS VHIALSAALE AVADANLVVD EALAPRVAVV LGSAGGPTKL
SAAATRALDE RGARGLSPYY FPGSGVDSAA GEVALHLGAQ GPSVCVVTAC ATGATSIGEA
ARLIRHGAAD VVVAGGVDDT MTRLDITGAA ISRALSTRND DPEAASRPFD RGRDGFVMSA
GGGVVVLESE EHARARGARV LGELAGYGAT TDAFHPTAPH PEAGPARRAM HDALAQAGLA
PQDVGYINAH GTSTPLNDTT ELRAIRGVFG SHATRIPVSS TKSMTGHMLG GAGAVELIVA
LESVLTGVTP PTINCDDPED PEVNFVPHTA QEHRVEAAMS NSFGFGGHNA VLIARRWAG
|
|---|
| |