Gene Amir_4724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4724 
Symbol 
ID8328922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp5635182 
End bp5636585 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content78% 
IMG OID644945168 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_003102400 
Protein GI256378740 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCTGACG TCCTCGTGAT CGGCGGCGGC CCCGCCGGGA TGGCCGCCGC GCGCGCCGCC 
CGCGAGAGCG GCGCGACCGT GACCCTGCTG GAGTCCGGCG ACGACCTCGG CGGCCAGTAC
TGGCGGCACC TGCCCGCCCA GCGCAGCGAC CCCGACGAGG GGAAGTGGCA CCACGGCTGG
CAGCGCTTCC TCGACCTGCG CGCCGCGCTC GTGGCCGACC CCGGCTGCGA GGTCGTCACC
ACCGCGCACG TCTGGTCCGT CGACCGCCGC GACGGCAGGC CACCGCTCGT GCACGCCCTC
GTCGGCCCGC CCGACGGCGG CGACCGCACC CCCCGCACCT TCGACCCGGA CGCCCTCGTC
CTGGCCACCG GCGCGCAGGA GCGCACCCTC CCGTTCCCCG GCTGGGACCT GCCCGGCGTC
TTCACGGCGG GCGCCGCGCA GGCGCTCGCC AAGGGCGAGC GGGTCGCGGT CGGCCGCCGC
GTGCTGGTCG CGGGCGCCGG TCCCTTCCTG CTCACCGCCG TGGCCAGCCT GGTCCGCGTC
GGCGCCCAGG TCGTCGGCGT CGTGGAGGCG GCGGACGCGA AGCGCCTGGC CAAGGGCTGG
GCCACCAAGC CGTGGCGGCT GGCCAAGGCC AGCCACAAGG CCACCGAGCT GGTCGGCTAC
CTGCGCGTGC TCGCCGCCAA CCGCGTCCCC TACCGCACCG GCTCGGCCGT CGTCGCCGCG
CACGGGACCG ACCGCGTCGA GGCCGTCACG GTCGCCCGCC TCACCCCGGA CTGGTCGCCG
GTCCCCGGCA CCGAGCGCCG GATCGAGGTC GACGCGGTCT GCGTCAGCCA CGCCTTCGTC
CCCCGCACCG AACTCGCCAT CTCCACGGGC TGCGCGCTCA CCGAGGACGG CTCGGTCCAG
GTGGACGACC GGCAGCGCAC CACCGTCCCC GGCGTCCTCA CGGCGGGCGA GCTGACCGGC
ATCGGCGGCG TCGACCTCGC CCTCGCCGAG GGCCGGATCG CCGGGGCCGT CGCCGCCGGG
GCCGAGCCCG ACGCCCGCGA CGTCAAGCGC CGCGCGGTCT TCCGCGAGTT CGCCACCCGC
CTCGCCGCCG CGCACGGCGT CCGCCCCGGC TGGCGCTCCT GGGTCGACGA CGACACCGTC
GTCTGCCGCT GCGAGGACGT CACCGCCGGA GCGCTGCGCA GCGCCGCCGA GCTGACCTGC
TCCAAGGGCC TGCGCTCCCT CAAGCTCACC ACCCGAGCGG GCCTCGGCCT GTGCCAGGGC
CGCACCTGCG GCCGGGCCGT CGAGGACCTG CTCACCGGGG TCCTGGACCC CGGACGCACC
GCCAACCGCC CCATCGCCGC ACCGCTTCGC CTCGGCGAGC TCGCCGAGCA CGGCCGCACC
TGCAACCGAG AGGACGTCCC ATGA
 
Protein sequence
MPDVLVIGGG PAGMAAARAA RESGATVTLL ESGDDLGGQY WRHLPAQRSD PDEGKWHHGW 
QRFLDLRAAL VADPGCEVVT TAHVWSVDRR DGRPPLVHAL VGPPDGGDRT PRTFDPDALV
LATGAQERTL PFPGWDLPGV FTAGAAQALA KGERVAVGRR VLVAGAGPFL LTAVASLVRV
GAQVVGVVEA ADAKRLAKGW ATKPWRLAKA SHKATELVGY LRVLAANRVP YRTGSAVVAA
HGTDRVEAVT VARLTPDWSP VPGTERRIEV DAVCVSHAFV PRTELAISTG CALTEDGSVQ
VDDRQRTTVP GVLTAGELTG IGGVDLALAE GRIAGAVAAG AEPDARDVKR RAVFREFATR
LAAAHGVRPG WRSWVDDDTV VCRCEDVTAG ALRSAAELTC SKGLRSLKLT TRAGLGLCQG
RTCGRAVEDL LTGVLDPGRT ANRPIAAPLR LGELAEHGRT CNREDVP